Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | Aba9201_RS15330 | Genome accession | NZ_CP023020 |
| Coordinates | 3128481..3128954 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214057.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 9201 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3123481..3133954
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba9201_RS15305 (Aba9201_15290) | - | 3123943..3126048 (-) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
| Aba9201_RS15310 | - | 3126089..3126219 (-) | 131 | Protein_2967 | hypothetical protein | - |
| Aba9201_RS15315 (Aba9201_15295) | rpoZ | 3126258..3126536 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| Aba9201_RS15320 (Aba9201_15300) | gmk | 3126609..3127238 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| Aba9201_RS15325 (Aba9201_15305) | ispH | 3127361..3128311 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| Aba9201_RS15330 (Aba9201_15310) | fimU | 3128481..3128954 (+) | 474 | WP_001214057.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| Aba9201_RS15335 (Aba9201_15315) | pilV | 3128948..3129508 (+) | 561 | WP_100222559.1 | type IV pilus modification protein PilV | Machinery gene |
| Aba9201_RS15340 (Aba9201_15320) | pilW | 3129509..3130510 (+) | 1002 | WP_000079202.1 | PilW family protein | Machinery gene |
| Aba9201_RS15345 (Aba9201_15325) | pilX | 3130507..3131325 (+) | 819 | WP_000149377.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16863.51 Da Isoelectric Point: 8.5355
>NTDB_id=244141 Aba9201_RS15330 WP_001214057.1 3128481..3128954(+) (fimU) [Acinetobacter baumannii strain 9201]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLEIKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLEIKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=244141 Aba9201_RS15330 WP_001214057.1 3128481..3128954(+) (fimU) [Acinetobacter baumannii strain 9201]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAATTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGTCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAATTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGTCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |