Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SH_RS04440 | Genome accession | NC_007168 |
| Coordinates | 941842..942240 (+) | Length | 132 a.a. |
| NCBI ID | WP_011275249.1 | Uniprot ID | A0A5B2YX53 |
| Organism | Staphylococcus haemolyticus JCSC1435 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 936842..947240
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SH_RS04410 (SH0932) | atpD | 936991..938403 (+) | 1413 | WP_011275243.1 | F0F1 ATP synthase subunit beta | - |
| SH_RS04415 (SH0933) | - | 938424..938825 (+) | 402 | WP_011275244.1 | F0F1 ATP synthase subunit epsilon | - |
| SH_RS04420 (SH0934) | - | 938953..939186 (+) | 234 | WP_011275245.1 | DUF1146 family protein | - |
| SH_RS04425 (SH0935) | murA | 939291..940556 (+) | 1266 | WP_011275246.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| SH_RS04430 (SH0936) | fabZ | 940596..941033 (+) | 438 | WP_011275247.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| SH_RS04435 (SH0937) | - | 941213..941656 (-) | 444 | WP_011275248.1 | YwpF-like family protein | - |
| SH_RS04440 (SH0938) | ssb | 941842..942240 (+) | 399 | WP_011275249.1 | single-stranded DNA-binding protein | Machinery gene |
| SH_RS04445 (SH0939) | - | 942579..943286 (+) | 708 | WP_011275250.1 | transglycosylase family protein | - |
| SH_RS04450 (SH0940) | tenA | 943575..944264 (+) | 690 | WP_011275251.1 | thiaminase II | - |
| SH_RS04455 (SH0941) | thiD | 944257..945078 (+) | 822 | WP_016931211.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| SH_RS04460 (SH0942) | thiM | 945071..945862 (+) | 792 | WP_011275253.1 | hydroxyethylthiazole kinase | - |
| SH_RS04465 (SH0943) | thiE | 945864..946502 (+) | 639 | WP_011275254.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 15141.05 Da Isoelectric Point: 4.7942
>NTDB_id=24399 SH_RS04440 WP_011275249.1 941842..942240(+) (ssb) [Staphylococcus haemolyticus JCSC1435]
MLNKIVIVGRLTKKAQIFENEEVKIATFCVATERNYKDENNEIACDYIFCKAFGKTATNIESYTDQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSKNDNILPNTSYDEDAYSFDHLEVIDVN
MLNKIVIVGRLTKKAQIFENEEVKIATFCVATERNYKDENNEIACDYIFCKAFGKTATNIESYTDQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSKNDNILPNTSYDEDAYSFDHLEVIDVN
Nucleotide
Download Length: 399 bp
>NTDB_id=24399 SH_RS04440 WP_011275249.1 941842..942240(+) (ssb) [Staphylococcus haemolyticus JCSC1435]
ATGCTAAATAAAATTGTGATAGTAGGTCGATTGACCAAAAAGGCACAAATATTTGAAAACGAGGAGGTGAAAATAGCTAC
GTTCTGTGTTGCAACTGAACGTAATTATAAAGATGAAAATAATGAAATAGCTTGTGATTATATTTTTTGTAAGGCATTTG
GTAAAACAGCAACAAATATAGAATCATATACAGACCAAGGCACTTTAGTTGGTATTACAGGACAAATGAGATCTCGTAAG
TACGATAAAGATGGCCAAACGCACTTTGTGACTGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATCTAAAAA
TGATAATATTCTTCCTAACACCTCATATGATGAAGACGCTTATTCCTTTGATCACCTTGAAGTGATTGATGTTAACTAA
ATGCTAAATAAAATTGTGATAGTAGGTCGATTGACCAAAAAGGCACAAATATTTGAAAACGAGGAGGTGAAAATAGCTAC
GTTCTGTGTTGCAACTGAACGTAATTATAAAGATGAAAATAATGAAATAGCTTGTGATTATATTTTTTGTAAGGCATTTG
GTAAAACAGCAACAAATATAGAATCATATACAGACCAAGGCACTTTAGTTGGTATTACAGGACAAATGAGATCTCGTAAG
TACGATAAAGATGGCCAAACGCACTTTGTGACTGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATCTAAAAA
TGATAATATTCTTCCTAACACCTCATATGATGAAGACGCTTATTCCTTTGATCACCTTGAAGTGATTGATGTTAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
75.573 |
99.242 |
0.75 |
| ssb | Staphylococcus aureus MW2 |
74.809 |
99.242 |
0.742 |