Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   SH_RS01875 Genome accession   NC_007168
Coordinates   419394..420290 (+) Length   298 a.a.
NCBI ID   WP_011274731.1    Uniprot ID   A0A2A1KAW6
Organism   Staphylococcus haemolyticus JCSC1435     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 414394..425290
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SH_RS01860 (SH0400) - 415274..416209 (+) 936 WP_041615072.1 LCP family protein -
  SH_RS01865 (SH0401) - 416299..417774 (-) 1476 WP_011274727.1 alkaline phosphatase -
  SH_RS13740 (SH0402) - 418173..418343 (+) 171 WP_011274728.1 hypothetical protein -
  SH_RS13745 (SH0403) - 418529..418693 (+) 165 WP_011274729.1 hypothetical protein -
  SH_RS01870 (SH0404) braR 418723..419391 (+) 669 WP_011274730.1 response regulator transcription factor Regulator
  SH_RS01875 (SH0405) braS 419394..420290 (+) 897 WP_011274731.1 sensor histidine kinase Regulator
  SH_RS01880 (SH0406) - 420472..421221 (+) 750 WP_011274732.1 ABC transporter ATP-binding protein -
  SH_RS01885 (SH0407) - 421223..423214 (+) 1992 WP_011274733.1 ABC transporter permease -
  SH_RS01890 (SH0408) - 423303..424496 (+) 1194 WP_011274734.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34605.18 Da        Isoelectric Point: 6.5843

>NTDB_id=24395 SH_RS01875 WP_011274731.1 419394..420290(+) (braS) [Staphylococcus haemolyticus JCSC1435]
MLKAFIKSILNEIIIVITCILLFLLIFFLFNLPLSAFLLGAGIMLFIMIIYWLVQLSGFKEQVQMADTIHELEHELQQVK
SDQTEYQANVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVKINDL
VRPLIMKYSIQFIDQKTKIHYERCEDEVLTDAQWCSIMIEQILNNALKYARGKDIWITFDQQQHVLTIRDNGVGISQADL
PKIFDKGYSGYNGRLNANSSGIGLFIVKHISQHLHHYVDVQSELNKGTAFSIYFPKNN

Nucleotide


Download         Length: 897 bp        

>NTDB_id=24395 SH_RS01875 WP_011274731.1 419394..420290(+) (braS) [Staphylococcus haemolyticus JCSC1435]
ATGCTGAAAGCTTTTATTAAATCGATATTAAATGAAATCATTATAGTTATTACATGTATATTATTATTCTTACTTATCTT
CTTTCTATTTAATCTGCCATTGAGTGCGTTTCTATTAGGCGCCGGAATTATGCTATTCATCATGATAATTTATTGGTTAG
TTCAATTAAGTGGATTTAAAGAACAAGTACAGATGGCAGATACTATTCATGAACTAGAGCATGAATTGCAACAGGTAAAA
AGTGATCAGACTGAATATCAAGCTAATGTGGAGAATTACTTCTTAACATGGGTTCATCAAATGAAGACACCTATTACAGC
ATCTAAATTGTTGTTAGAGCGTAATGAAGATAATGTCGTCAATCGAGTGCGGCAAGAAATTATTCAAATTGATAATTATA
CAAGTTTAGCGTTAAGTTATTTAAAATTGATGAACCAGGAAACGGATATGTCCTTTTCAAAAGTGAAGATTAATGACCTT
GTCCGTCCATTAATTATGAAATATTCTATTCAATTTATTGATCAGAAGACAAAGATTCATTATGAACGGTGTGAGGATGA
AGTTCTGACTGATGCACAATGGTGTTCAATAATGATTGAACAGATTCTAAATAATGCATTGAAGTATGCACGAGGTAAGG
ACATTTGGATTACGTTTGACCAACAACAGCATGTATTAACTATTCGTGATAATGGCGTCGGTATTAGTCAAGCTGACTTA
CCGAAGATCTTTGATAAAGGCTATTCAGGATATAATGGTCGATTGAATGCTAATTCATCAGGCATTGGATTGTTTATTGT
TAAACATATCTCTCAACATTTACATCATTATGTAGATGTACAGTCTGAGTTGAACAAAGGTACGGCATTTAGTATTTATT
TCCCGAAAAATAATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A1KAW6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

63.014

97.987

0.617

Multiple sequence alignment