Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CGQ02_RS03145 | Genome accession | NZ_CP022904 |
| Coordinates | 607882..608277 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain 629 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 602882..613277
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGQ02_RS03115 (CGQ02_00553) | - | 604140..604544 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| CGQ02_RS03120 | - | 604882..604974 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| CGQ02_RS03125 (CGQ02_00554) | - | 605106..605339 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| CGQ02_RS03130 (CGQ02_00555) | murA | 605450..606715 (+) | 1266 | WP_033859994.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| CGQ02_RS03135 (CGQ02_00556) | fabZ | 606749..607189 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| CGQ02_RS03140 (CGQ02_00557) | - | 607248..607688 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| CGQ02_RS03145 (CGQ02_00558) | ssb | 607882..608277 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| CGQ02_RS03150 (CGQ02_00559) | sceD | 608666..609361 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| CGQ02_RS03155 (CGQ02_00560) | tenA | 609748..610437 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| CGQ02_RS03160 (CGQ02_00561) | thiD | 610430..611260 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CGQ02_RS03165 (CGQ02_00562) | thiM | 611244..612035 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| CGQ02_RS03170 (CGQ02_00563) | thiE | 612037..612678 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=243180 CGQ02_RS03145 WP_000932694.1 607882..608277(+) (ssb) [Staphylococcus aureus strain 629]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=243180 CGQ02_RS03145 WP_000932694.1 607882..608277(+) (ssb) [Staphylococcus aureus strain 629]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |