Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CGQ01_RS03135 | Genome accession | NZ_CP022903 |
| Coordinates | 606550..606945 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain 187 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 601550..611945
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGQ01_RS03105 (CGQ01_00551) | - | 602808..603212 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| CGQ01_RS03110 | - | 603550..603642 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| CGQ01_RS03115 (CGQ01_00552) | - | 603774..604007 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| CGQ01_RS03120 (CGQ01_00553) | murA | 604118..605383 (+) | 1266 | WP_033859994.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| CGQ01_RS03125 (CGQ01_00554) | fabZ | 605417..605857 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| CGQ01_RS03130 (CGQ01_00555) | - | 605916..606356 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| CGQ01_RS03135 (CGQ01_00556) | ssb | 606550..606945 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| CGQ01_RS03140 (CGQ01_00557) | sceD | 607334..608029 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| CGQ01_RS03145 (CGQ01_00558) | tenA | 608416..609105 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| CGQ01_RS03150 (CGQ01_00559) | thiD | 609098..609928 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CGQ01_RS03155 (CGQ01_00560) | thiM | 609912..610703 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| CGQ01_RS03160 (CGQ01_00561) | thiE | 610705..611346 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=243136 CGQ01_RS03135 WP_000932694.1 606550..606945(+) (ssb) [Staphylococcus aureus strain 187]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=243136 CGQ01_RS03135 WP_000932694.1 606550..606945(+) (ssb) [Staphylococcus aureus strain 187]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |