Detailed information
Bioinformatically predicted
Overview
| Name | vraR | Type | Regulator |
| Locus tag | STU_RS16030 | Genome accession | NC_006448 |
| Coordinates | 1254576..1255220 (-) | Length | 214 a.a. |
| NCBI ID | WP_011226287.1 | Uniprot ID | Q5M3J3 |
| Organism | Streptococcus thermophilus LMG 18311 | ||
| Function | repress expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1249576..1260220
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STU_RS16005 (stu1417) | - | 1251678..1252676 (-) | 999 | WP_011226284.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| STU_RS16010 (stu1418) | trmD | 1252678..1253397 (-) | 720 | WP_011226285.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| STU_RS16015 (stu1419) | rimM | 1253387..1253905 (-) | 519 | WP_011226286.1 | ribosome maturation factor RimM | - |
| STU_RS16030 (stu1420) | vraR | 1254576..1255220 (-) | 645 | WP_011226287.1 | response regulator transcription factor | Regulator |
| STU_RS16035 (stu1421) | - | 1255210..1256220 (-) | 1011 | WP_011226288.1 | sensor histidine kinase | - |
| STU_RS16040 (stu1422) | liaF | 1256217..1256915 (-) | 699 | WP_011226289.1 | cell wall-active antibiotics response protein LiaF | - |
| STU_RS20685 (stu1423) | - | 1257181..1257336 (-) | 156 | WP_011226290.1 | ion channel | - |
| STU_RS16045 (stu1425) | stkP/pknB | 1257973..1259844 (-) | 1872 | WP_011226292.1 | Stk1 family PASTA domain-containing Ser/Thr kinase | Regulator |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24062.41 Da Isoelectric Point: 4.5864
>NTDB_id=24287 STU_RS16030 WP_011226287.1 1254576..1255220(-) (vraR) [Streptococcus thermophilus LMG 18311]
MSNKINVILVDDHEMVRLGLKSFLNLQGDVELVGEAENGREGVDLALELRPDVVVMDLVMPELDGVQATLELLKEWPEAK
ILVLTSYLDNEKIYPVIEAGAKGYMLKTSSAAEILNSIRKVYRGEEAIETEVDNKIKYHDSHPNLHDDLTARERDILALL
AKGYDNQTIANELFISLKTVKTHVSNILGKLNVDDRTQAVVYAFRHHLVSQDDE
MSNKINVILVDDHEMVRLGLKSFLNLQGDVELVGEAENGREGVDLALELRPDVVVMDLVMPELDGVQATLELLKEWPEAK
ILVLTSYLDNEKIYPVIEAGAKGYMLKTSSAAEILNSIRKVYRGEEAIETEVDNKIKYHDSHPNLHDDLTARERDILALL
AKGYDNQTIANELFISLKTVKTHVSNILGKLNVDDRTQAVVYAFRHHLVSQDDE
Nucleotide
Download Length: 645 bp
>NTDB_id=24287 STU_RS16030 WP_011226287.1 1254576..1255220(-) (vraR) [Streptococcus thermophilus LMG 18311]
ATGTCGAATAAGATTAATGTAATTTTGGTAGATGACCATGAAATGGTTCGTTTAGGCCTTAAGAGTTTCTTGAATCTCCA
AGGAGATGTAGAACTGGTTGGAGAGGCAGAAAACGGCCGTGAGGGTGTCGATCTTGCCCTGGAGCTACGACCAGATGTCG
TTGTTATGGACCTTGTTATGCCTGAGCTAGATGGTGTTCAGGCGACTTTGGAATTGCTAAAAGAATGGCCTGAAGCTAAG
ATTCTAGTTTTGACCAGCTATTTGGACAATGAAAAAATTTATCCAGTCATTGAAGCTGGCGCCAAAGGCTATATGCTTAA
AACGAGCAGTGCAGCAGAGATTCTAAATAGTATCCGTAAGGTTTACCGTGGAGAGGAAGCTATCGAAACTGAGGTAGACA
ATAAGATTAAATACCATGATAGTCACCCGAACTTACATGATGACTTGACCGCGCGCGAACGTGATATCTTAGCCCTCCTA
GCTAAAGGCTATGACAATCAAACCATTGCTAACGAACTTTTTATTTCTTTAAAAACCGTCAAGACTCATGTGTCTAATAT
CCTTGGGAAATTAAATGTTGATGACCGTACTCAGGCTGTAGTTTATGCCTTTAGACATCATCTGGTTTCACAGGATGATG
AATAA
ATGTCGAATAAGATTAATGTAATTTTGGTAGATGACCATGAAATGGTTCGTTTAGGCCTTAAGAGTTTCTTGAATCTCCA
AGGAGATGTAGAACTGGTTGGAGAGGCAGAAAACGGCCGTGAGGGTGTCGATCTTGCCCTGGAGCTACGACCAGATGTCG
TTGTTATGGACCTTGTTATGCCTGAGCTAGATGGTGTTCAGGCGACTTTGGAATTGCTAAAAGAATGGCCTGAAGCTAAG
ATTCTAGTTTTGACCAGCTATTTGGACAATGAAAAAATTTATCCAGTCATTGAAGCTGGCGCCAAAGGCTATATGCTTAA
AACGAGCAGTGCAGCAGAGATTCTAAATAGTATCCGTAAGGTTTACCGTGGAGAGGAAGCTATCGAAACTGAGGTAGACA
ATAAGATTAAATACCATGATAGTCACCCGAACTTACATGATGACTTGACCGCGCGCGAACGTGATATCTTAGCCCTCCTA
GCTAAAGGCTATGACAATCAAACCATTGCTAACGAACTTTTTATTTCTTTAAAAACCGTCAAGACTCATGTGTCTAATAT
CCTTGGGAAATTAAATGTTGATGACCGTACTCAGGCTGTAGTTTATGCCTTTAGACATCATCTGGTTTCACAGGATGATG
AATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| vraR | Staphylococcus aureus N315 |
50 |
96.262 |
0.481 |
| degU | Bacillus subtilis subsp. subtilis str. 168 |
35.714 |
100 |
0.374 |