Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   STU_RS15715 Genome accession   NC_006448
Coordinates   1184196..1184876 (-) Length   226 a.a.
NCBI ID   WP_011226224.1    Uniprot ID   Q5M3P0
Organism   Streptococcus thermophilus LMG 18311     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1179196..1189876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STU_RS15690 (stu1331) - 1179404..1179853 (-) 450 WP_011226219.1 cytidine deaminase family protein -
  STU_RS19980 - 1179864..1180043 (-) 180 Protein_1156 ABC transporter permease -
  STU_RS15695 (stu1332) - 1180045..1180242 (-) 198 Protein_1157 YkgJ family cysteine cluster protein -
  STU_RS15700 (stu1333) - 1180327..1182327 (-) 2001 WP_011226221.1 ABC transporter permease -
  STU_RS15705 (stu1334) - 1182329..1183087 (-) 759 WP_011226222.1 ABC transporter ATP-binding protein -
  STU_RS15710 (stu1335) - 1183232..1184206 (-) 975 WP_011226223.1 sensor histidine kinase -
  STU_RS15715 (stu1336) braR 1184196..1184876 (-) 681 WP_011226224.1 response regulator transcription factor Regulator
  STU_RS15720 - 1185327..1185908 (+) 582 Protein_1162 xanthine phosphoribosyltransferase -
  STU_RS19570 - 1185908..1187177 (+) 1270 Protein_1163 nucleobase:cation symporter-2 family protein -
  STU_RS15735 (stu1342) - 1187305..1188654 (+) 1350 WP_011226229.1 MATE family efflux transporter -

Sequence

Protein


Download         Length: 226 a.a.        Molecular weight: 26100.45 Da        Isoelectric Point: 4.9992

>NTDB_id=24286 STU_RS15715 WP_011226224.1 1184196..1184876(-) (braR) [Streptococcus thermophilus LMG 18311]
MHKILLVEDDEVIRQQVKKMLEQWGYEVVLVEDFMEVLSIFVKVEPHLVLMDIGLPLFNGYHWCQEIRKVSKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDQNVLLAKIQGLLRRSYEFGKDQNLLEYMGVILNLKAMDLVYQGEVVSLTKNEFQIL
QVLFDHAGNIVSREDLMKELWNSDFFIDDNTLSVNVARLRKKLEAVGLKDFIETKKGVGYGLRHDG

Nucleotide


Download         Length: 681 bp        

>NTDB_id=24286 STU_RS15715 WP_011226224.1 1184196..1184876(-) (braR) [Streptococcus thermophilus LMG 18311]
ATGCATAAGATTTTATTAGTTGAGGACGACGAGGTTATCCGTCAACAAGTCAAAAAAATGCTAGAACAGTGGGGTTACGA
AGTTGTTCTTGTTGAAGATTTCATGGAAGTATTATCTATTTTTGTAAAAGTAGAGCCCCACTTGGTTCTTATGGACATTG
GTTTACCTCTATTTAATGGTTATCATTGGTGTCAGGAAATTCGTAAGGTCTCCAAGGTGCCTATTATGTTCTTGTCTTCC
AGAGATCAGGCCATGGATATCGTTATGGCAATCAATATGGGTGGGGACGACTTTGTGACTAAACCCTTTGACCAAAATGT
TCTCTTGGCAAAAATTCAAGGGCTTTTGCGCCGATCTTATGAGTTTGGAAAGGATCAGAATCTTTTGGAATATATGGGTG
TGATTTTGAACCTTAAGGCCATGGATCTGGTTTATCAGGGAGAAGTCGTTTCTTTGACTAAGAACGAGTTTCAGATTTTA
CAAGTTCTCTTCGACCATGCTGGAAATATCGTTAGTCGGGAAGACCTCATGAAGGAGCTTTGGAACAGTGACTTCTTTAT
TGATGATAATACCCTGTCTGTCAATGTGGCACGTTTACGTAAGAAGTTAGAGGCTGTTGGTTTGAAGGACTTTATTGAAA
CCAAGAAAGGTGTCGGTTACGGGTTGCGTCATGATGGATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)

Response regulator receiver domain (Response_reg)

(4-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M3P0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

52.294

96.46

0.504
  micA Streptococcus pneumoniae Cp1015

35.043

100

0.363