Detailed information NTG0242637

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: CJZ71_RS10220
• Genome accession: NZ_CP022891
• Coordinates: 1881530..1882675 (+)
• Length: 381 a.a.
• NCBI ID: WP_069837832.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DKU_NT_03
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1876530..1887675

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJZ71_RS10195 (CJZ71_10195)	albF	1876550..1877830 (+)	1281	WP_069837829.1	pitrilysin family protein	-
CJZ71_RS10200 (CJZ71_10200)	albG	1877827..1878528 (+)	702	WP_069837830.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
CJZ71_RS10205 (CJZ71_10205)	ywhL	1878534..1879910 (-)	1377	WP_069837831.1	YncE family protein	-
CJZ71_RS10210 (CJZ71_10210)	ywhK	1879949..1881300 (-)	1352	Protein_2017	YncE family protein	-
CJZ71_RS23165 (CJZ71_10215)	-	1881297..1881527 (-)	231	Protein_2018	hypothetical protein	-
CJZ71_RS10220 (CJZ71_10220)	rapF	1881530..1882675 (+)	1146	WP_069837832.1	response regulator aspartate phosphatase RapF	Regulator
CJZ71_RS10225 (CJZ71_10225)	phrF	1882659..1882778 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
CJZ71_RS10230 (CJZ71_10230)	-	1882876..1883303 (+)	428	Protein_2021	YbaK/EbsC family protein	-
CJZ71_RS10235 (CJZ71_10235)	speB	1883368..1884240 (-)	873	WP_003227545.1	agmatinase	-
CJZ71_RS10240 (CJZ71_10240)	speE	1884301..1885131 (-)	831	WP_003227543.1	spermidine synthase	-
CJZ71_RS10245 (CJZ71_10245)	pbpG	1885333..1887408 (+)	2076	WP_069837833.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45624.07 Da
• Isoelectric Point: 5.0624

>NTDB_id=242637 CJZ71_RS10220 WP_069837832.1 1881530..1882675(+) (rapF) [Bacillus subtilis strain DKU_NT_03]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFTIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=242637 CJZ71_RS10220 WP_069837832.1 1881530..1882675(+) (rapF) [Bacillus subtilis strain DKU_NT_03]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACAGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCACTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.688	100	0.987
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57