Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | CJO35_RS13115 | Genome accession | NZ_CP022874 |
| Coordinates | 2514213..2514548 (+) | Length | 111 a.a. |
| NCBI ID | WP_025804940.1 | Uniprot ID | A0AB37GFT9 |
| Organism | Bacillus sp. 1s-1 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2509213..2519548
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJO35_RS13095 (CJO35_13100) | gcvT | 2509645..2510739 (-) | 1095 | WP_003183436.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CJO35_RS13100 (CJO35_13105) | - | 2511332..2513011 (+) | 1680 | WP_003183439.1 | SNF2-related protein | - |
| CJO35_RS13105 (CJO35_13110) | - | 2513018..2513812 (+) | 795 | WP_003183441.1 | YqhG family protein | - |
| CJO35_RS13110 (CJO35_13115) | sinI | 2514003..2514179 (+) | 177 | WP_003183444.1 | anti-repressor SinI family protein | Regulator |
| CJO35_RS13115 (CJO35_13120) | sinR | 2514213..2514548 (+) | 336 | WP_025804940.1 | helix-turn-helix domain-containing protein | Regulator |
| CJO35_RS13120 (CJO35_13125) | - | 2514653..2515447 (-) | 795 | WP_003183447.1 | TasA family protein | - |
| CJO35_RS13125 (CJO35_13130) | - | 2515521..2516105 (-) | 585 | WP_003183449.1 | signal peptidase I | - |
| CJO35_RS13130 (CJO35_13135) | tapA | 2516102..2516830 (-) | 729 | WP_003183451.1 | amyloid fiber anchoring/assembly protein TapA | - |
| CJO35_RS13135 (CJO35_13140) | - | 2517140..2517427 (+) | 288 | WP_223307118.1 | YqzG/YhdC family protein | - |
| CJO35_RS13140 (CJO35_13145) | - | 2517451..2517633 (-) | 183 | WP_003183456.1 | YqzE family protein | - |
| CJO35_RS13145 (CJO35_13150) | comGG | 2517722..2518087 (-) | 366 | WP_003183459.1 | competence type IV pilus minor pilin ComGG | - |
| CJO35_RS13150 (CJO35_13155) | comGF | 2518100..2518588 (-) | 489 | WP_011201694.1 | competence type IV pilus minor pilin ComGF | - |
| CJO35_RS13155 (CJO35_13160) | comGE | 2518497..2518844 (-) | 348 | WP_009327907.1 | competence type IV pilus minor pilin ComGE | - |
| CJO35_RS13160 (CJO35_13165) | comGD | 2518828..2519265 (-) | 438 | WP_009327905.1 | competence type IV pilus minor pilin ComGD | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12991.60 Da Isoelectric Point: 5.9495
>NTDB_id=242406 CJO35_RS13115 WP_025804940.1 2514213..2514548(+) (sinR) [Bacillus sp. 1s-1]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKDETEYDGQLDSEWEN
LVRDAMASGVSKKQFREFLDYQKWKRRQEKE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKDETEYDGQLDSEWEN
LVRDAMASGVSKKQFREFLDYQKWKRRQEKE
Nucleotide
Download Length: 336 bp
>NTDB_id=242406 CJO35_RS13115 WP_025804940.1 2514213..2514548(+) (sinR) [Bacillus sp. 1s-1]
TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTACTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTAGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACCCTGCTCGATGAGAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAT
CTAGTTCGTGACGCTATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATTTTTAGATTATCAAAAGTGGAAGAGAAG
ACAGGAAAAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTACTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTAGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACCCTGCTCGATGAGAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAT
CTAGTTCGTGACGCTATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATTTTTAGATTATCAAAAGTGGAAGAGAAG
ACAGGAAAAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
92.793 |
100 |
0.928 |