Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   CGP84_RS04825 Genome accession   NZ_CP022682
Coordinates   956912..957898 (+) Length   328 a.a.
NCBI ID   WP_000959278.1    Uniprot ID   A0A6B5F529
Organism   Staphylococcus aureus strain 78     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 951912..962898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGP84_RS04800 (CGP84_00883) opp4B 952115..953077 (+) 963 WP_115288371.1 oligopeptide ABC transporter permease -
  CGP84_RS04805 (CGP84_00884) opp4C 953089..953970 (+) 882 WP_001180269.1 oligopeptide ABC transporter permease -
  CGP84_RS04810 (CGP84_00885) trpS 954012..955001 (-) 990 WP_000448929.1 tryptophan--tRNA ligase -
  CGP84_RS04815 (CGP84_00886) spxA 955296..955691 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  CGP84_RS04820 (CGP84_00887) mecA 956072..956791 (+) 720 WP_001217727.1 adaptor protein MecA -
  CGP84_RS04825 (CGP84_00888) coiA 956912..957898 (+) 987 WP_000959278.1 competence protein CoiA family protein Machinery gene
  CGP84_RS04830 (CGP84_00889) pepF 957946..959754 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  CGP84_RS04835 (CGP84_00890) yjbH 960215..961021 (-) 807 WP_000896694.1 protease adaptor protein YjbH -
  CGP84_RS04840 (CGP84_00891) - 961044..961409 (-) 366 WP_000214067.1 truncated hemoglobin YjbI -
  CGP84_RS04845 (CGP84_00892) - 961513..962106 (-) 594 WP_000224616.1 CYTH domain-containing protein -
  CGP84_RS04850 (CGP84_00893) - 962292..962639 (+) 348 WP_001242107.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38679.31 Da        Isoelectric Point: 9.5882

>NTDB_id=241604 CGP84_RS04825 WP_000959278.1 956912..957898(+) (coiA) [Staphylococcus aureus strain 78]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKGNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTVQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLLSDNLNYFKLKKFIVALDSKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=241604 CGP84_RS04825 WP_000959278.1 956912..957898(+) (coiA) [Staphylococcus aureus strain 78]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTTAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTTG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTACAG
TTAACTGTTCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTACTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGATAGCAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6B5F529

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.646

100

0.966
  coiA Staphylococcus aureus MW2

96.646

100

0.966

Multiple sequence alignment