Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   CHF41_RS03605 Genome accession   NZ_CP022680
Coordinates   711806..712540 (+) Length   244 a.a.
NCBI ID   WP_119876031.1    Uniprot ID   -
Organism   Streptococcus respiraculi strain HTS25     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 706806..717540
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CHF41_RS03575 - 707269..708729 (+) 1461 WP_119876025.1 NCS2 family permease -
  CHF41_RS03580 tsaE 708937..709383 (+) 447 WP_119876026.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  CHF41_RS03585 - 709370..709912 (+) 543 WP_119876027.1 GNAT family N-acetyltransferase -
  CHF41_RS03590 brpA 709899..711005 (+) 1107 WP_119876028.1 biofilm formation/cell division transcriptional regulator BrpA -
  CHF41_RS03595 - 711040..711330 (-) 291 WP_119876029.1 chemotaxis protein -
  CHF41_RS03600 - 711327..711743 (-) 417 WP_119876030.1 HIT family protein -
  CHF41_RS03605 pptA 711806..712540 (+) 735 WP_119876031.1 ABC transporter ATP-binding protein Regulator
  CHF41_RS03610 - 712537..713580 (+) 1044 WP_119876032.1 ABC transporter permease -
  CHF41_RS03615 ccrZ 713631..714425 (+) 795 WP_119876033.1 cell cycle regulator CcrZ -
  CHF41_RS03620 trmB 714422..715057 (+) 636 WP_119876034.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  CHF41_RS03625 rimP 715191..715661 (+) 471 WP_119876035.1 ribosome maturation factor RimP -
  CHF41_RS03630 nusA 715695..716843 (+) 1149 WP_119876036.1 transcription termination factor NusA -
  CHF41_RS03635 rnpM 716862..717158 (+) 297 WP_119876037.1 RNase P modulator RnpM -
  CHF41_RS03640 - 717115..717453 (+) 339 WP_119876038.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27038.25 Da        Isoelectric Point: 4.3849

>NTDB_id=241563 CHF41_RS03605 WP_119876031.1 711806..712540(+) (pptA) [Streptococcus respiraculi strain HTS25]
MLEVKNVTGGYVNIPVLKDISFQVADGELVGLIGLNGAGKSTTVKEIIGLLSPYQGQILIDGESLQANPQAYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLDWDEAFTQAEKLLKIFRLDEKLDWFPVHFSKGMKQKVMIICAFMVSPSLLIVDEPF
LGLDPVAIDDLIHLLEEEKAKGTSILMSTHVLDSAEKMCDRFVILHQGEVRAEGDLAELQAAFGREQASLNELYLTLTKE
GEGA

Nucleotide


Download         Length: 735 bp        

>NTDB_id=241563 CHF41_RS03605 WP_119876031.1 711806..712540(+) (pptA) [Streptococcus respiraculi strain HTS25]
ATGTTAGAAGTAAAAAATGTGACGGGGGGCTATGTCAATATCCCTGTTTTAAAAGATATTTCCTTTCAAGTGGCAGATGG
TGAGTTAGTCGGCTTGATTGGTTTAAATGGGGCGGGAAAGTCAACTACCGTTAAGGAAATTATTGGACTCTTGTCACCCT
ATCAAGGACAGATTTTAATTGATGGGGAGAGTCTGCAGGCCAATCCGCAAGCCTACCGCAAAAAAATCGGCTTTATCCCT
GAAACACCTAGCCTATATGAAGAATTAACCTTGAAAGAGCATTTGGAAGTGGTGGCTATGGCCTATGACTTGGACTGGGA
CGAGGCTTTTACTCAGGCTGAAAAGTTGCTTAAAATCTTCCGTTTGGATGAAAAATTAGATTGGTTTCCAGTGCATTTTT
CAAAGGGAATGAAGCAAAAAGTGATGATTATTTGTGCCTTTATGGTTAGTCCGAGCCTCCTGATTGTCGATGAGCCCTTT
TTGGGACTCGATCCAGTAGCGATTGATGATTTGATTCACTTATTGGAAGAAGAAAAGGCAAAAGGGACGTCTATCTTGAT
GTCGACCCACGTGCTGGACTCGGCTGAGAAAATGTGCGACCGTTTTGTCATCTTACACCAAGGTGAGGTAAGAGCGGAAG
GGGACTTGGCAGAGTTACAGGCAGCATTTGGACGCGAACAGGCGAGCTTGAATGAACTCTATCTTACTCTAACCAAAGAA
GGAGAAGGGGCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.059

97.951

0.725
  pptA Streptococcus thermophilus LMD-9

73.222

97.951

0.717

Multiple sequence alignment