Detailed information NTG0241249

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: BaGK_RS13705
• Genome accession: NZ_CP022653
• Coordinates: 2803650..2805983 (-)
• Length: 777 a.a.
• NCBI ID: WP_094232442.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain GQJK17
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2798650..2810983

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BaGK_RS13675 (BaGK_13675)	-	2798980..2799318 (-)	339	WP_004429433.1	YqxA family protein	-
BaGK_RS13680 (BaGK_13680)	spoIIP	2799337..2800545 (-)	1209	WP_010789251.1	stage II sporulation protein P	-
BaGK_RS13685 (BaGK_13685)	gpr	2800612..2801715 (-)	1104	WP_003325397.1	GPR endopeptidase	-
BaGK_RS13690 (BaGK_13690)	rpsT	2801920..2802186 (+)	267	WP_003325396.1	30S ribosomal protein S20	-
BaGK_RS13695 (BaGK_13695)	holA	2802201..2803244 (-)	1044	WP_094232441.1	DNA polymerase III subunit delta	-
BaGK_RS21885	-	2803284..2803433 (-)	150	WP_010789254.1	hypothetical protein	-
BaGK_RS13700 (BaGK_13700)	-	2803474..2803608 (+)	135	WP_003229983.1	YqzM family protein	-
BaGK_RS13705 (BaGK_13705)	comEC	2803650..2805983 (-)	2334	WP_094232442.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
BaGK_RS13710 (BaGK_13710)	-	2805990..2806559 (-)	570	WP_003325392.1	ComE operon protein 2	-
BaGK_RS13715 (BaGK_13715)	comEA	2806627..2807256 (-)	630	WP_094232443.1	helix-hairpin-helix domain-containing protein	Machinery gene
BaGK_RS13720 (BaGK_13720)	comER	2807340..2808161 (+)	822	WP_003325389.1	late competence protein ComER	-
BaGK_RS13725 (BaGK_13725)	-	2808231..2808971 (-)	741	WP_094232444.1	class I SAM-dependent DNA methyltransferase	-
BaGK_RS13730 (BaGK_13730)	rsfS	2808968..2809324 (-)	357	WP_094232445.1	ribosome silencing factor	-
BaGK_RS13735 (BaGK_13735)	yqeK	2809341..2809901 (-)	561	WP_094232446.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
BaGK_RS13740 (BaGK_13740)	-	2809891..2810460 (-)	570	WP_003325385.1	nicotinate-nucleotide adenylyltransferase	-
BaGK_RS13745 (BaGK_13745)	yhbY	2810472..2810762 (-)	291	WP_003325384.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 777 a.a.
• Molecular weight: 87024.99 Da
• Isoelectric Point: 9.1975

>NTDB_id=241249 BaGK_RS13705 WP_094232442.1 2803650..2805983(-) (comEC) [Bacillus atrophaeus strain GQJK17]
MKNTRLLLPLAAASATAGIAAASFFSALLIFVLSLFFVYIKTKQLSLVFVSLSAFTIYFFLTSVIDSHNVSSYDIGTYKL
RAVIQEIPKIDGDRISMVVRTPDGEKWASSYKMESLAEKEKLSQIEPGTACTFTGSLKKPKNATVPGTFDYKQYLYSQHI
HWNYSITAIQNCSAADGIQYRLLSVRKSLILFMNDHVPESSAGIVQALILGDRFYLMDDVLEAYQKLGVVHLLAISGLHV
GIVTAGIFYVLIRIGITREKAAILLLLFLPVYTILTGAAPSVMRAALMSGLYFIGSLWGKRMNPSIVICLSYLILLLFNP
YHLFQIGFQLSFAVSFSLILSSSIFKKLQSGGLVQLAMVSLVAQLGSLPILIYYFQQFSLISIPMNIIMVPFYTMFVMPF
SMIGFLLLSLSEPVGEYLFYWFDYIMRWSDKLIKYAADIEQFTVIAARPNALVLFGLIGSIVVLLTAMEKSALYQRLLSV
LLFIAMLFLVVIFPRLDPEGEVDMLDIGQGDSMFISAPYQRGHVMIDTGGILSYLTEPWREKRHPFSLSEKVLIPFLTAK
GIKQLDALILTHADQDHIGETKALIKRHKVKQLIVPKGFVSEPNDEKVLRTAQQEGIRITEVKRGDTFQIKDLQFRVLSP
ETPDLNSKNNSSLVLWMKTGHLSWVLTGDLEKEGEQEIMKAFPDLKADILKAGHHGSKGSTGEEFVRQLKPKAAIISAGE
NNRYHHPHQEVLDILKAHSVRIFRTDQSGTIQYRFKSGFGTFSVYPPYDTTGMTETN

Nucleotide

• Length: 2334 bp

>NTDB_id=241249 BaGK_RS13705 WP_094232442.1 2803650..2805983(-) (comEC) [Bacillus atrophaeus strain GQJK17]
ATGAAGAACACACGCCTTCTTTTGCCTCTGGCGGCAGCATCAGCAACGGCTGGCATAGCTGCTGCCTCCTTTTTCTCCGC
ACTTCTCATATTCGTTTTATCACTCTTCTTTGTTTATATCAAAACAAAACAGCTCTCACTCGTTTTTGTTAGTTTATCGG
CTTTTACGATCTATTTTTTCTTAACCTCTGTTATCGATTCTCATAATGTATCGTCCTATGACATCGGCACCTATAAGCTT
CGGGCGGTGATTCAGGAAATACCAAAGATTGACGGCGACCGTATATCCATGGTAGTTCGAACGCCGGATGGGGAAAAATG
GGCTTCATCATATAAAATGGAGTCGCTTGCTGAAAAGGAAAAACTTTCACAGATAGAGCCAGGGACGGCTTGTACGTTTA
CCGGTTCTTTAAAAAAACCGAAAAACGCAACGGTTCCCGGCACTTTCGATTATAAACAGTATCTGTACAGCCAGCATATT
CACTGGAATTACTCGATAACAGCAATCCAAAATTGCAGCGCGGCAGATGGAATACAATATCGGCTTTTAAGCGTGAGAAA
GTCTCTTATTTTATTTATGAATGACCATGTTCCGGAATCCTCAGCAGGCATCGTGCAGGCGCTCATCCTGGGTGACAGAT
TTTATCTTATGGACGATGTGCTGGAAGCGTATCAAAAGCTCGGAGTTGTCCATCTGCTTGCGATTTCAGGGCTTCATGTA
GGTATTGTGACAGCTGGTATATTCTATGTGCTCATTCGAATTGGGATAACGAGAGAGAAGGCTGCCATTCTGCTGCTGTT
GTTTTTGCCTGTTTATACGATTTTAACCGGAGCGGCTCCGTCTGTGATGCGCGCAGCTCTTATGTCAGGGCTTTATTTTA
TCGGCAGTTTGTGGGGAAAGCGTATGAACCCTTCAATAGTGATCTGTCTTTCTTATTTAATTCTCCTTTTGTTTAATCCG
TATCATCTTTTTCAAATAGGGTTTCAGCTCTCATTTGCCGTAAGTTTCTCTTTAATACTTTCTTCTTCTATTTTTAAAAA
ACTTCAGAGCGGGGGACTCGTGCAGCTCGCCATGGTGTCACTCGTCGCTCAGCTTGGATCGCTTCCCATCCTTATCTATT
ATTTTCAGCAGTTTTCTCTTATCAGTATACCGATGAATATCATTATGGTGCCTTTTTATACGATGTTTGTCATGCCGTTT
TCTATGATAGGTTTTCTTTTGTTAAGTTTGTCTGAGCCGGTCGGTGAGTACCTGTTTTATTGGTTTGATTACATCATGCG
CTGGAGTGACAAGCTGATAAAGTATGCTGCAGACATTGAGCAATTTACAGTGATTGCAGCTCGTCCAAATGCGCTTGTCT
TGTTTGGGCTGATTGGATCTATCGTTGTTTTGCTGACAGCCATGGAGAAATCCGCCCTTTACCAAAGACTTCTGTCTGTG
CTGCTCTTTATCGCAATGCTTTTTCTGGTGGTTATTTTTCCTCGCCTGGACCCCGAGGGAGAAGTGGATATGCTTGATAT
CGGTCAGGGAGACAGCATGTTTATCAGCGCTCCGTATCAGCGCGGCCATGTGATGATAGACACTGGAGGAATCCTTTCAT
ACTTAACAGAGCCATGGAGGGAAAAACGGCATCCTTTTTCGCTTAGCGAAAAGGTGCTCATTCCTTTCTTAACAGCAAAA
GGCATTAAACAGCTTGATGCCTTAATTTTGACTCATGCGGACCAAGACCATATAGGGGAAACAAAGGCTCTGATCAAGCG
GCATAAAGTCAAACAGCTCATTGTGCCGAAAGGATTTGTTTCTGAACCGAATGATGAAAAAGTGCTGCGGACCGCACAGC
AAGAGGGAATTCGCATTACAGAGGTTAAACGAGGCGACACCTTTCAGATAAAGGATTTACAGTTTCGCGTACTGTCGCCT
GAGACTCCCGACCTGAACAGCAAAAATAACTCTTCTCTCGTGCTATGGATGAAAACAGGTCATCTCAGCTGGGTGCTGAC
AGGCGATCTCGAAAAGGAAGGGGAACAGGAGATCATGAAAGCTTTTCCGGATCTAAAAGCGGATATTTTAAAGGCGGGGC
ATCATGGCAGTAAAGGATCTACCGGAGAAGAGTTTGTCCGTCAGCTGAAACCAAAGGCGGCAATTATTTCTGCCGGTGAG
AATAATCGGTATCACCATCCCCATCAGGAAGTCCTTGATATATTGAAAGCTCATTCTGTCCGCATTTTCCGCACTGATCA
AAGCGGGACGATCCAATACAGATTTAAAAGCGGGTTTGGAACCTTTTCTGTCTATCCTCCATATGATACAACAGGTATGA
CGGAGACGAACTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-467)

• Domain of unknown function (DUF4131) (DUF4131) (25-169)

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	65.122	100	0.651