Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   BaGK_RS02150 Genome accession   NZ_CP022653
Coordinates   438749..438868 (+) Length   39 a.a.
NCBI ID   WP_004430266.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain GQJK17     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 433749..443868
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BaGK_RS02135 (BaGK_02135) yclJ 435332..436018 (+) 687 WP_088116504.1 two-component system response regulator YclJ -
  BaGK_RS02140 (BaGK_02140) - 436005..437423 (+) 1419 WP_094231369.1 sensor histidine kinase -
  BaGK_RS02145 (BaGK_02145) rapC 437617..438765 (+) 1149 WP_004430265.1 tetratricopeptide repeat protein Regulator
  BaGK_RS02150 (BaGK_02150) phrC 438749..438868 (+) 120 WP_004430266.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  BaGK_RS02155 (BaGK_02155) - 439003..439110 (-) 108 WP_072053240.1 YjcZ family sporulation protein -
  BaGK_RS02160 (BaGK_02160) - 439314..439397 (-) 84 WP_370499808.1 YjcZ family sporulation protein -
  BaGK_RS02165 (BaGK_02165) - 439528..440892 (-) 1365 WP_094231370.1 aspartate kinase -
  BaGK_RS02170 (BaGK_02170) ceuB 441325..442275 (+) 951 WP_010789705.1 ABC transporter permease Machinery gene
  BaGK_RS02175 (BaGK_02175) - 442268..443215 (+) 948 WP_010789704.1 iron chelate uptake ABC transporter family permease subunit -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4111.89 Da        Isoelectric Point: 7.9858

>NTDB_id=241208 BaGK_RS02150 WP_004430266.1 438749..438868(+) (phrC) [Bacillus atrophaeus strain GQJK17]
MKLKSKLLIICLAAAAVFATVGVSNAEAPDYQVTERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=241208 BaGK_RS02150 WP_004430266.1 438749..438868(+) (phrC) [Bacillus atrophaeus strain GQJK17]
ATGAAATTGAAATCTAAATTGCTCATTATTTGTTTGGCTGCAGCTGCTGTGTTTGCAACAGTTGGAGTGTCCAATGCTGA
AGCGCCTGATTATCAGGTGACAGAAAGAGGAATGACGTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

75

100

0.769

Multiple sequence alignment