Detailed information NTG0241207

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BaGK_RS02145
• Genome accession: NZ_CP022653
• Coordinates: 437617..438765 (+)
• Length: 382 a.a.
• NCBI ID: WP_004430265.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain GQJK17
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 432617..443765

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BaGK_RS02125 (BaGK_02125)	-	432936..433616 (-)	681	WP_094231367.1	ABC transporter ATP-binding protein	-
BaGK_RS02130 (BaGK_02130)	-	433634..435118 (-)	1485	WP_094231368.1	ABC transporter permease	-
BaGK_RS02135 (BaGK_02135)	yclJ	435332..436018 (+)	687	WP_088116504.1	two-component system response regulator YclJ	-
BaGK_RS02140 (BaGK_02140)	-	436005..437423 (+)	1419	WP_094231369.1	sensor histidine kinase	-
BaGK_RS02145 (BaGK_02145)	rapC	437617..438765 (+)	1149	WP_004430265.1	tetratricopeptide repeat protein	Regulator
BaGK_RS02150 (BaGK_02150)	phrC	438749..438868 (+)	120	WP_004430266.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
BaGK_RS02155 (BaGK_02155)	-	439003..439110 (-)	108	WP_072053240.1	YjcZ family sporulation protein	-
BaGK_RS02160 (BaGK_02160)	-	439314..439397 (-)	84	WP_370499808.1	YjcZ family sporulation protein	-
BaGK_RS02165 (BaGK_02165)	-	439528..440892 (-)	1365	WP_094231370.1	aspartate kinase	-
BaGK_RS02170 (BaGK_02170)	ceuB	441325..442275 (+)	951	WP_010789705.1	ABC transporter permease	Machinery gene
BaGK_RS02175 (BaGK_02175)	-	442268..443215 (+)	948	WP_010789704.1	iron chelate uptake ABC transporter family permease subunit	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45756.03 Da
• Isoelectric Point: 4.8173

>NTDB_id=241207 BaGK_RS02145 WP_004430265.1 437617..438765(+) (rapC) [Bacillus atrophaeus strain GQJK17]
MKSEVIPSSAVGQKINEWYKYIRTFSVPDAEILKAEIEREIEHMEDDPNLLLYFSLMEFRHQLMLDYLEPLEKLKIEDQP
SLSELLRNIDSNQADLKGLLDYYVNFFRGMHEFDKREFISAITYYKQAEKRLSFVADHIERAEFYFKVAEAYYYMKQTYF
SLIHIKNAYEIYAEQETYNVRIIQCHFVFGVNLMDERRFEQAARHFELALHMAESENKAQLVGRALYNIGLCYYNQDLLE
PAIDYFERAVSIFESNAIIKSLPQAYFLITQIYYKCKNNSKAVEYHSRGYEYAKETDDIDYMVKFEFLKTLYQAQPDEQG
IEKCFYYLKNKNMYADIEDLALVVAKYYYEQKNFEMSSSYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=241207 BaGK_RS02145 WP_004430265.1 437617..438765(+) (rapC) [Bacillus atrophaeus strain GQJK17]
ATGAAGAGCGAGGTGATTCCTTCTTCAGCAGTCGGTCAAAAAATTAACGAGTGGTATAAGTATATTCGTACGTTCAGTGT
ACCGGACGCCGAAATTCTTAAAGCCGAGATTGAACGGGAAATTGAACATATGGAAGACGATCCGAACTTGCTGCTATATT
TCTCATTAATGGAATTCCGCCACCAGCTGATGCTTGATTATCTTGAGCCGTTAGAAAAATTAAAAATAGAGGACCAGCCG
AGCTTGTCAGAATTACTGCGCAACATTGACAGCAATCAGGCTGATTTAAAAGGGCTGCTTGATTATTATGTAAACTTTTT
TCGGGGGATGCACGAATTTGATAAGAGAGAATTCATTTCAGCCATCACCTATTACAAACAGGCTGAAAAAAGACTTTCCT
TTGTAGCGGATCATATTGAAAGAGCCGAGTTCTATTTTAAAGTGGCCGAAGCTTATTACTATATGAAACAGACGTATTTC
TCACTGATCCATATCAAAAATGCCTACGAAATATATGCTGAGCAAGAAACATATAATGTGAGAATTATCCAGTGCCATTT
TGTATTCGGAGTAAATTTGATGGATGAAAGGCGTTTCGAACAAGCCGCGCGCCATTTTGAACTCGCATTACATATGGCGG
AATCAGAAAATAAAGCACAATTGGTCGGAAGAGCGCTTTATAATATTGGGTTGTGTTATTACAACCAAGATCTTCTTGAG
CCTGCCATTGACTATTTTGAAAGAGCGGTTTCTATATTCGAAAGCAACGCCATCATTAAATCTCTTCCTCAGGCATATTT
TCTGATCACGCAGATTTATTATAAATGTAAAAATAATTCTAAAGCAGTGGAATATCACAGCAGGGGTTATGAATATGCTA
AAGAAACAGATGATATTGACTACATGGTGAAATTTGAATTTTTAAAAACTCTATATCAAGCCCAGCCGGATGAACAAGGA
ATCGAAAAATGCTTTTATTACCTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGCACTAGTAGTAGCTAAATA
TTACTATGAACAAAAAAACTTCGAAATGTCATCTTCCTACTTTCTCAAAGTAGAAGAGGCCAGAAAACAAATACAAAGGA
GTGAAGGTTTATATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_1) (224-256)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	85.079	100	0.851
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571