Detailed information NTG0240753

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: CF389_RS17110
• Genome accession: NZ_CP022556
• Coordinates: 3452090..3453253 (+)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain NJAU-Z9
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3447090..3458253

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CF389_RS17090	tuaH	3447506..3448702 (+)	1197	WP_003151381.1	teichuronic acid biosynthesis protein TuaH	-
CF389_RS17095	-	3448835..3449911 (+)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
CF389_RS17100	-	3450001..3451215 (-)	1215	WP_003151383.1	LCP family protein	-
CF389_RS17105	-	3451220..3451867 (-)	648	WP_003151384.1	YigZ family protein	-
CF389_RS17110	degS	3452090..3453253 (+)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
CF389_RS17115	degU	3453330..3454019 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
CF389_RS17120	-	3454117..3454965 (+)	849	WP_003151387.1	DegV family protein	-
CF389_RS17125	comFA	3455073..3456458 (+)	1386	WP_003151388.1	DEAD/DEAH box helicase	Machinery gene
CF389_RS17130	-	3456516..3456800 (+)	285	WP_003151389.1	late competence development ComFB family protein	-
CF389_RS17135	comFC	3456806..3457495 (+)	690	WP_198317760.1	phosphoribosyltransferase family protein	Machinery gene
CF389_RS17140	-	3457569..3457988 (+)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=240753 CF389_RS17110 WP_003151385.1 3452090..3453253(+) (degS) [Bacillus velezensis strain NJAU-Z9]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=240753 CF389_RS17110 WP_003151385.1 3452090..3453253(+) (degS) [Bacillus velezensis strain NJAU-Z9]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAGTCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948