Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   CG712_RS06020 Genome accession   NZ_CP022547
Coordinates   1148184..1148951 (+) Length   255 a.a.
NCBI ID   WP_002952299.1    Uniprot ID   A0AAN2DBC4
Organism   Streptococcus thermophilus strain B59671     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1143184..1153951
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG712_RS06005 (CG712_06040) - 1145500..1146183 (-) 684 WP_096811735.1 YoaK family protein -
  CG712_RS06010 (CG712_06045) rlmH 1146199..1146678 (-) 480 WP_002952297.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  CG712_RS06015 (CG712_06050) htrA 1146883..1148118 (+) 1236 WP_096811736.1 S1C family serine protease Regulator
  CG712_RS06020 (CG712_06055) spo0J 1148184..1148951 (+) 768 WP_002952299.1 ParB/RepB/Spo0J family partition protein Regulator
  CG712_RS06025 (CG712_06060) dnaA 1149191..1150555 (+) 1365 WP_002948584.1 chromosomal replication initiator protein DnaA -
  CG712_RS06030 (CG712_06065) dnaN 1150710..1151846 (+) 1137 WP_096811737.1 DNA polymerase III subunit beta -
  CG712_RS06035 (CG712_06070) - 1151897..1152088 (+) 192 WP_002886272.1 DUF951 domain-containing protein -
  CG712_RS06040 (CG712_06075) ychF 1152301..1153416 (+) 1116 WP_002948588.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29447.81 Da        Isoelectric Point: 9.6649

>NTDB_id=240580 CG712_RS06020 WP_002952299.1 1148184..1148951(+) (spo0J) [Streptococcus thermophilus strain B59671]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNALRLLQLPREIQTSIENGSLSQG
HARALLAIEDSRKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=240580 CG712_RS06020 WP_002952299.1 1148184..1148951(+) (spo0J) [Streptococcus thermophilus strain B59671]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGATATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGCTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCGAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTCTCCCCATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569

Multiple sequence alignment