Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   CG712_RS06015 Genome accession   NZ_CP022547
Coordinates   1146883..1148118 (+) Length   411 a.a.
NCBI ID   WP_096811736.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain B59671     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1141883..1153118
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG712_RS05985 (CG712_06020) - 1142350..1144956 (+) 2607 WP_096811734.1 YfhO family protein -
  CG712_RS06005 (CG712_06040) - 1145500..1146183 (-) 684 WP_096811735.1 YoaK family protein -
  CG712_RS06010 (CG712_06045) rlmH 1146199..1146678 (-) 480 WP_002952297.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  CG712_RS06015 (CG712_06050) htrA 1146883..1148118 (+) 1236 WP_096811736.1 S1C family serine protease Regulator
  CG712_RS06020 (CG712_06055) spo0J 1148184..1148951 (+) 768 WP_002952299.1 ParB/RepB/Spo0J family partition protein Regulator
  CG712_RS06025 (CG712_06060) dnaA 1149191..1150555 (+) 1365 WP_002948584.1 chromosomal replication initiator protein DnaA -
  CG712_RS06030 (CG712_06065) dnaN 1150710..1151846 (+) 1137 WP_096811737.1 DNA polymerase III subunit beta -
  CG712_RS06035 (CG712_06070) - 1151897..1152088 (+) 192 WP_002886272.1 DUF951 domain-containing protein -

Sequence


Protein


Download         Length: 411 a.a.        Molecular weight: 42858.15 Da        Isoelectric Point: 4.7654

>NTDB_id=240579 CG712_RS06015 WP_096811736.1 1146883..1148118(+) (htrA) [Streptococcus thermophilus strain B59671]
MKKFNWKKIVAPIAMLIIGLLGGLLGAFILLTAAGVSFTNTTDTGVKTAKTVYTNITDTTKAVKKVQNAVVSVINYQEGS
SSDSLNDLYGRIFGGGDSSDSSQENSKDSDGLQVAGEGSGVIYKKDGKEAYIVTNNHVVDGAKKLEIMLSDGSKITGELV
GKDTYSDLAVVKVSSDKITTVAEFADSNSLTVGEKAIAIGSPLGTEYANSVTEGIVSSLSRTITMQNDNGETVSTNAIQT
NAAINPGNSGGALVNIEGQVIGINSSKISSTSAVAGSAVEGMGFAIPSNDVVEIINQLEKDGKVTRPALGISIADLNSLS
SSATSKLDLPDEVKSGVVVGSVQKGMPADGKLQEYDVITEIDGKKISSKTDIQTNLYSHSIGDTIKVTFYRGKDKKTVDL
KLTKSTEDISD

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=240579 CG712_RS06015 WP_096811736.1 1146883..1148118(+) (htrA) [Streptococcus thermophilus strain B59671]
ATGAAAAAATTTAACTGGAAGAAGATAGTCGCGCCAATTGCAATGCTAATTATTGGCTTACTAGGTGGTTTACTTGGTGC
CTTTATCCTACTAACAGCAGCCGGGGTATCTTTTACCAATACAACAGATACTGGAGTAAAAACGGCTAAGACCGTCTACA
CCAATATAACAGATACAACTAAGGCTGTTAAGAAAGTACAAAATGCTGTTGTTTCTGTCATCAATTATCAAGAAGGTTCA
TCTTCAGATTCTCTAAATGACCTTTATGGCCGTATCTTTGGCGGAGGGGACAGTTCTGATTCTAGCCAAGAAAATTCAAA
AGATTCAGATGGTCTGCAGGTCGCTGGTGAAGGTTCTGGAGTCATCTATAAAAAAGATGGCAAAGAAGCCTACATCGTAA
CCAATAACCACGTTGTCGATGGGGCTAAAAAACTTGAAATCATGCTTTCGGATGGTTCGAAAATTACTGGTGAACTTGTT
GGTAAAGACACTTACTCTGACCTAGCAGTTGTCAAAGTATCTTCAGATAAAATAACAACTGTTGCAGAATTTGCAGACTC
AAACTCCCTTACTGTTGGTGAAAAAGCAATTGCTATCGGTAGCCCACTTGGTACCGAATACGCCAACTCAGTAACAGAAG
GAATCGTTTCTAGCCTTAGCCGTACTATAACGATGCAAAACGATAATGGTGAAACTGTATCAACAAACGCTATCCAAACA
AATGCAGCCATTAACCCTGGTAACTCTGGTGGTGCCCTAGTCAATATTGAAGGACAAGTTATCGGTATTAATTCAAGTAA
AATTTCATCAACGTCTGCAGTCGCTGGTAGTGCTGTTGAAGGTATGGGGTTTGCCATTCCATCAAACGATGTTGTTGAAA
TCATCAATCAATTAGAAAAAGATGGTAAAGTTACACGACCAGCACTAGGAATCTCAATAGCAGATCTTAATAGCCTTTCT
AGCAGCGCAACTTCTAAATTAGATTTACCAGATGAGGTCAAATCCGGTGTTGTTGTCGGTAGTGTTCAGAAAGGTATGCC
AGCTGACGGTAAACTTCAAGAATATGATGTTATCACTGAGATTGATGGTAAGAAAATCAGCTCAAAAACTGATATTCAAA
CCAATCTTTACAGCCATAGTATTGGAGATACTATCAAGGTAACCTTCTATCGTGGTAAAGATAAGAAAACTGTAGATCTT
AAATTAACAAAATCTACAGAAGACATATCTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.538

98.054

0.603

  htrA Streptococcus gordonii str. Challis substr. CH1

57.039

100

0.572

  htrA Streptococcus mitis NCTC 12261

53.545

99.513

0.533

  htrA Streptococcus pneumoniae TIGR4

53.301

99.513

0.53

  htrA Streptococcus pneumoniae D39

53.301

99.513

0.53

  htrA Streptococcus pneumoniae Rx1

53.301

99.513

0.53

  htrA Streptococcus pneumoniae R6

53.301

99.513

0.53


Multiple sequence alignment