Detailed information    

insolico Bioinformatically predicted

Overview

Name   recR   Type   Machinery gene
Locus tag   C7M30_RS10500 Genome accession   NZ_CP028218
Coordinates   2034644..2035240 (-) Length   198 a.a.
NCBI ID   WP_003225425.1    Uniprot ID   G4NT17
Organism   Bacillus subtilis strain SRCM102756     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2029644..2040240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M30_RS10490 (C7M30_02094) bofA 2034072..2034335 (-) 264 WP_015715090.1 sigma-K factor-processing regulator BofA -
  C7M30_RS10495 (C7M30_02095) yaaL 2034402..2034626 (-) 225 WP_003242387.1 YaaL family protein -
  C7M30_RS10500 (C7M30_02096) recR 2034644..2035240 (-) 597 WP_003225425.1 recombination protein RecR Machinery gene
  C7M30_RS10505 (C7M30_02097) ebfC 2035255..2035578 (-) 324 WP_003225427.1 YbaB/EbfC family nucleoid-associated protein -
  C7M30_RS10510 (C7M30_02098) dnaX 2035602..2037293 (-) 1692 WP_029317164.1 DNA polymerase III subunit gamma/tau -
  C7M30_RS10520 (C7M30_02099) tadA 2037770..2038255 (-) 486 WP_003226784.1 tRNA adenosine(34) deaminase TadA -
  C7M30_RS10525 (C7M30_02100) yaaI 2038341..2038886 (+) 546 WP_160244368.1 isochorismatase family cysteine hydrolase -
  C7M30_RS10530 (C7M30_02101) sleL 2038956..2040239 (+) 1284 WP_160244369.1 glycoside hydrolase family 18 protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 21974.53 Da        Isoelectric Point: 5.3504

>NTDB_id=240518 C7M30_RS10500 WP_003225425.1 2034644..2035240(-) (recR) [Bacillus subtilis strain SRCM102756]
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSVCGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL

Nucleotide


Download         Length: 597 bp        

>NTDB_id=240518 C7M30_RS10500 WP_003225425.1 2034644..2035240(-) (recR) [Bacillus subtilis strain SRCM102756]
ATGCAATATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGATGTAGTATTAGATTTTGCGAAAGCATTAGTAAATGCGAAACGCAACC
TGACATATTGTTCAGTTTGCGGGCATATTACAGATCAGGACCCTTGCTATATATGTGAAGATACGCGCAGGGATAAGTCT
GTTATCTGTGTTGTGCAAGACCCTAAGGATGTTATCGCTATGGAGAAAATGAAGGAATACAACGGACAGTATCACGTTCT
TCACGGCGCTATTTCTCCAATGGACGGCATCGGACCGGAGGATATTAAAATACCAGAATTGTTAAAACGATTACAGGATG
ATCAAGTGACAGAAGTGATCCTCGCGACAAACCCTAATATAGAAGGGGAAGCAACGGCGATGTATATATCAAGGCTCCTC
AAGCCGTCTGGTATTAAGCTCTCCCGTATTGCCCACGGACTGCCCGTCGGCGGTGACTTGGAATATGCTGACGAGGTCAC
TCTTTCTAAAGCACTTGAAGGAAGACGTGAATTGTAA

Domains

Predicted by InterProScan.

RecR protein (RecR_ZnF)

(40-78)

Toprim domain (Toprim_4)

(80-171)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NT17

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recR Bacillus subtilis subsp. subtilis str. 168

100

100

1
  recR Streptococcus pneumoniae R6

62.121

100

0.621
  recR Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

52.041

98.99

0.515