Detailed information NTG0240310

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C7M29_RS03200
• Genome accession: NZ_CP028217
• Coordinates: 640629..641750 (-)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102751
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 635629..646750

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M29_RS03180 (C7M29_00632)	znuC	636138..636833 (-)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-
C7M29_RS03185 (C7M29_00633)	znuA	636888..637847 (-)	960	WP_161476480.1	metal ABC transporter substrate-binding protein	-
C7M29_RS03190 (C7M29_00634)	ycdG	638035..639720 (-)	1686	WP_161476481.1	alpha-glucosidase	-
C7M29_RS03195 (C7M29_00635)	ycdF	639745..640521 (-)	777	WP_161476482.1	SDR family oxidoreductase	-
C7M29_RS03200 (C7M29_00636)	rapF	640629..641750 (-)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
C7M29_RS03205 (C7M29_00637)	cwlK	641873..642376 (+)	504	WP_017695036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
C7M29_RS03210 (C7M29_00638)	ycdC	642384..643745 (-)	1362	WP_161476483.1	YcdB/YcdC domain-containing protein	-
C7M29_RS03215 (C7M29_00639)	ycdB	643932..645353 (-)	1422	WP_161476484.1	YcdB/YcdC domain-containing protein	-
C7M29_RS03220	-	645527..645679 (+)	153	WP_021481864.1	hypothetical protein	-
C7M29_RS03225 (C7M29_00640)	ycdA	645680..646744 (+)	1065	WP_029317224.1	DUF4352 domain-containing protein	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=240310 C7M29_RS03200 WP_015715201.1 640629..641750(-) (rapF) [Bacillus subtilis strain SRCM102751]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=240310 C7M29_RS03200 WP_015715201.1 640629..641750(-) (rapF) [Bacillus subtilis strain SRCM102751]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTATTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGAATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCACGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTATCGCAGGCTGATGAATATTAAAAAGAAGCTTGCTGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405