Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | PNC201_RS11765 | Genome accession | NZ_CP022522 |
| Coordinates | 2730213..2730521 (-) | Length | 102 a.a. |
| NCBI ID | WP_102057154.1 | Uniprot ID | A0A2K9JZ51 |
| Organism | Pseudoalteromonas sp. NC201 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2725213..2735521
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PNC201_RS11745 (PNC201_11650) | - | 2725732..2727489 (-) | 1758 | WP_102057151.1 | winged helix-turn-helix domain-containing protein | - |
| PNC201_RS11750 (PNC201_11655) | - | 2727635..2729134 (+) | 1500 | WP_102057152.1 | amidohydrolase family protein | - |
| PNC201_RS11755 (PNC201_11660) | dsbB | 2729334..2729843 (+) | 510 | WP_102057153.1 | disulfide bond formation protein DsbB | - |
| PNC201_RS11760 (PNC201_11665) | - | 2729856..2730161 (+) | 306 | WP_017216140.1 | hypothetical protein | - |
| PNC201_RS11765 (PNC201_11670) | comE1/comEA | 2730213..2730521 (-) | 309 | WP_102057154.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| PNC201_RS11770 (PNC201_11675) | - | 2730792..2731106 (+) | 315 | WP_010606713.1 | YebG family protein | - |
| PNC201_RS11775 (PNC201_11680) | - | 2731201..2732391 (-) | 1191 | WP_010606712.1 | amino acid aminotransferase | - |
| PNC201_RS11780 (PNC201_11685) | - | 2732571..2733236 (-) | 666 | WP_102057155.1 | GAF domain-containing protein | - |
| PNC201_RS11785 (PNC201_11690) | - | 2733364..2735022 (-) | 1659 | WP_102057156.1 | fused response regulator/phosphatase | - |
| PNC201_RS11790 (PNC201_11695) | - | 2735044..2735349 (-) | 306 | WP_010371095.1 | STAS domain-containing protein | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 10918.88 Da Isoelectric Point: 10.4801
>NTDB_id=240211 PNC201_RS11765 WP_102057154.1 2730213..2730521(-) (comE1/comEA) [Pseudoalteromonas sp. NC201]
MFNKPTILSILLALGLSCSSVLAKPTDQAKSVYQTQQQSAVLDINSADASALSSLPGIGIRKAEAIVEYRKKMGRFKTTT
ELLEVKGIGKGILAKLEGKIRV
MFNKPTILSILLALGLSCSSVLAKPTDQAKSVYQTQQQSAVLDINSADASALSSLPGIGIRKAEAIVEYRKKMGRFKTTT
ELLEVKGIGKGILAKLEGKIRV
Nucleotide
Download Length: 309 bp
>NTDB_id=240211 PNC201_RS11765 WP_102057154.1 2730213..2730521(-) (comE1/comEA) [Pseudoalteromonas sp. NC201]
ATGTTCAATAAACCCACCATACTTTCTATTTTATTGGCGCTAGGTTTAAGCTGTTCAAGTGTGCTCGCAAAACCTACGGA
TCAAGCAAAATCTGTCTATCAAACACAGCAGCAAAGTGCTGTACTCGATATTAATTCCGCTGACGCTTCGGCGCTTTCAA
GTTTACCAGGGATTGGTATTCGTAAAGCTGAAGCCATCGTAGAGTACCGTAAGAAAATGGGGCGCTTTAAAACAACAACG
GAGTTGCTGGAAGTAAAAGGAATTGGGAAAGGAATATTGGCAAAACTGGAGGGGAAAATTAGAGTCTAG
ATGTTCAATAAACCCACCATACTTTCTATTTTATTGGCGCTAGGTTTAAGCTGTTCAAGTGTGCTCGCAAAACCTACGGA
TCAAGCAAAATCTGTCTATCAAACACAGCAGCAAAGTGCTGTACTCGATATTAATTCCGCTGACGCTTCGGCGCTTTCAA
GTTTACCAGGGATTGGTATTCGTAAAGCTGAAGCCATCGTAGAGTACCGTAAGAAAATGGGGCGCTTTAAAACAACAACG
GAGTTGCTGGAAGTAAAAGGAATTGGGAAAGGAATATTGGCAAAACTGGAGGGGAAAATTAGAGTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.954 |
100 |
0.48 |
| comEA | Acinetobacter baumannii D1279779 |
31.746 |
100 |
0.392 |
| comEA | Acinetobacter baumannii strain A118 |
30.328 |
100 |
0.363 |