Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   C7M26_RS19450 Genome accession   NZ_CP028212
Coordinates   3717980..3718843 (+) Length   287 a.a.
NCBI ID   WP_032722437.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102748     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3712980..3723843
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M26_RS19420 (C7M26_03826) pncA 3713445..3713996 (+) 552 WP_014477836.1 isochorismatase family cysteine hydrolase -
  C7M26_RS19425 (C7M26_03827) pncB 3714012..3715484 (+) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  C7M26_RS19430 (C7M26_03828) pdeH 3715621..3716850 (+) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  C7M26_RS19435 (C7M26_03829) - 3716826..3717194 (-) 369 WP_014477834.1 hypothetical protein -
  C7M26_RS19440 - 3717308..3717433 (-) 126 WP_003228793.1 hypothetical protein -
  C7M26_RS19445 (C7M26_03830) degQ 3717655..3717795 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  C7M26_RS19450 (C7M26_03831) comQ 3717980..3718843 (+) 864 WP_032722437.1 polyprenyl synthetase family protein Regulator
  C7M26_RS19455 (C7M26_03832) comX 3718845..3719066 (+) 222 WP_014480704.1 competence pheromone ComX -
  C7M26_RS19460 (C7M26_03833) comP 3719082..3721394 (+) 2313 WP_032722435.1 histidine kinase Regulator
  C7M26_RS19465 (C7M26_03834) comA 3721475..3722119 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  C7M26_RS19470 (C7M26_03835) yuxO 3722138..3722518 (+) 381 WP_017695528.1 hotdog fold thioesterase -
  C7M26_RS19475 (C7M26_03836) mnhG 3722557..3722931 (-) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  C7M26_RS19480 (C7M26_03837) mrpF 3722915..3723199 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  C7M26_RS19485 (C7M26_03838) mrpE 3723199..3723675 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -

Sequence


Protein


Download         Length: 287 a.a.        Molecular weight: 32833.50 Da        Isoelectric Point: 5.2201

>NTDB_id=239967 C7M26_RS19450 WP_032722437.1 3717980..3718843(+) (comQ) [Bacillus subtilis strain SRCM102748]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNNNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=239967 C7M26_RS19450 WP_032722437.1 3717980..3718843(+) (comQ) [Bacillus subtilis strain SRCM102748]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACAATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains


Predicted by InterProScan.

(45-194)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439