Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CEK59_RS28350 Genome accession   NZ_CP022478
Coordinates   5972101..5972508 (+) Length   135 a.a.
NCBI ID   WP_127891103.1    Uniprot ID   -
Organism   Pseudomonas aeruginosa strain LW     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5967101..5977508
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEK59_RS28320 (CEK59_28210) - 5967149..5968153 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  CEK59_RS28325 (CEK59_28215) pyrR 5968177..5968689 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  CEK59_RS28330 (CEK59_28220) ruvX 5968801..5969235 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  CEK59_RS28335 (CEK59_28225) - 5969235..5969804 (-) 570 WP_003084577.1 YqgE/AlgH family protein -
  CEK59_RS28340 (CEK59_28230) - 5969853..5970746 (-) 894 WP_003084580.1 TonB family protein -
  CEK59_RS28345 (CEK59_28235) gshB 5970893..5971846 (-) 954 WP_003110019.1 glutathione synthase -
  CEK59_RS28350 (CEK59_28240) pilG 5972101..5972508 (+) 408 WP_127891103.1 twitching motility response regulator PilG Regulator
  CEK59_RS28355 (CEK59_28245) pilH 5972555..5972920 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  CEK59_RS28360 (CEK59_28250) - 5972971..5973507 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  CEK59_RS28365 (CEK59_28255) pilJ 5973592..5975640 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  CEK59_RS28370 (CEK59_28260) pilK 5975701..5976576 (+) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14684.10 Da        Isoelectric Point: 7.1340

>NTDB_id=239961 CEK59_RS28350 WP_127891103.1 5972101..5972508(+) (pilG) [Pseudomonas aeruginosa strain LW]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLLDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=239961 CEK59_RS28350 WP_127891103.1 5972101..5972508(+) (pilG) [Pseudomonas aeruginosa strain LW]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGCTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.016

94.074

0.696
  vicR Streptococcus mutans UA159

43.59

86.667

0.378

Multiple sequence alignment