Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | CEK59_RS20710 | Genome accession | NZ_CP022478 |
| Coordinates | 4344924..4345481 (+) | Length | 185 a.a. |
| NCBI ID | WP_003094697.1 | Uniprot ID | A0A6N0KGD7 |
| Organism | Pseudomonas aeruginosa strain LW | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4339924..4350481
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEK59_RS20690 (CEK59_20600) | pilR | 4341200..4342537 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| CEK59_RS20695 (CEK59_20605) | thiO | 4342583..4343677 (-) | 1095 | WP_058160265.1 | glycine oxidase ThiO | - |
| CEK59_RS20700 (CEK59_20610) | - | 4343812..4344321 (+) | 510 | WP_015503652.1 | Tfp pilus assembly protein FimT/FimU | - |
| CEK59_RS20705 (CEK59_20615) | - | 4344427..4344933 (+) | 507 | WP_003110423.1 | Tfp pilus assembly protein FimT/FimU | - |
| CEK59_RS20710 (CEK59_20620) | pilV | 4344924..4345481 (+) | 558 | WP_003094697.1 | type 4a pilus minor pilin PilV | Machinery gene |
| CEK59_RS20715 (CEK59_20625) | pilW | 4345478..4346302 (+) | 825 | WP_058160261.1 | type 4a pilus minor pilin PilW | - |
| CEK59_RS20720 (CEK59_20630) | pilX | 4346299..4346886 (+) | 588 | WP_003094700.1 | type 4a pilus minor pilin PilX | - |
| CEK59_RS20725 (CEK59_20635) | pilY1 | 4346898..4350389 (+) | 3492 | WP_033956576.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20069.21 Da Isoelectric Point: 8.2164
>NTDB_id=239950 CEK59_RS20710 WP_003094697.1 4344924..4345481(+) (pilV) [Pseudomonas aeruginosa strain LW]
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=239950 CEK59_RS20710 WP_003094697.1 4344924..4345481(+) (pilV) [Pseudomonas aeruginosa strain LW]
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
97.838 |
100 |
0.978 |