Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   C7M26_RS16380 Genome accession   NZ_CP028212
Coordinates   3127207..3127581 (+) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain SRCM102748     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3122207..3132581
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M26_RS16360 (C7M26_03220) acdA 3122746..3123885 (+) 1140 WP_032722686.1 acyl-CoA dehydrogenase AcdA -
  C7M26_RS16365 (C7M26_03221) rpoE 3124068..3124589 (+) 522 WP_014665742.1 DNA-directed RNA polymerase subunit delta -
  C7M26_RS16370 (C7M26_03222) pyrG 3124831..3126438 (+) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  C7M26_RS16375 (C7M26_03223) ywjG 3126520..3127041 (-) 522 WP_014481199.1 DUF2529 domain-containing protein -
  C7M26_RS16380 (C7M26_03224) letA 3127207..3127581 (+) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  C7M26_RS16385 (C7M26_03225) fbaA 3127762..3128619 (+) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  C7M26_RS16390 (C7M26_03226) fsa 3128739..3129377 (+) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  C7M26_RS16395 (C7M26_03227) murAB 3129756..3131045 (+) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  C7M26_RS16400 (C7M26_03228) glpX 3131076..3132041 (+) 966 WP_014481197.1 class II fructose-bisphosphatase -
  C7M26_RS16405 - 3132256..3132417 (+) 162 WP_003227632.1 hypothetical protein -

Sequence


Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=239949 C7M26_RS16380 WP_003227621.1 3127207..3127581(+) (letA) [Bacillus subtilis strain SRCM102748]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=239949 C7M26_RS16380 WP_003227621.1 3127207..3127581(+) (letA) [Bacillus subtilis strain SRCM102748]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363

  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363


Multiple sequence alignment