Detailed information NTG0239934

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: CEK59_RS04835
• Genome accession: NZ_CP022478
• Coordinates: 1006903..1009128 (+)
• Length: 741 a.a.
• NCBI ID: WP_058160226.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain LW
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1001903..1014128

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEK59_RS04805 (CEK59_04770)	-	1001903..1002211 (-)	309	WP_003091175.1	hypothetical protein	-
CEK59_RS04810 (CEK59_04775)	-	1002221..1002820 (-)	600	WP_003105196.1	PilZ domain-containing protein	-
CEK59_RS04815 (CEK59_04780)	-	1002923..1004173 (+)	1251	WP_058160227.1	lipoprotein-releasing ABC transporter permease subunit	-
CEK59_RS04820 (CEK59_04785)	lolD	1004166..1004849 (+)	684	WP_003091168.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
CEK59_RS04825 (CEK59_04790)	-	1004919..1006163 (+)	1245	WP_003105198.1	lipoprotein-releasing ABC transporter permease subunit	-
CEK59_RS04830 (CEK59_04795)	-	1006239..1006772 (-)	534	WP_003091165.1	DUF2062 domain-containing protein	-
CEK59_RS04835 (CEK59_04800)	comA	1006903..1009128 (+)	2226	WP_058160226.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CEK59_RS04840 (CEK59_04805)	exbB	1009201..1009836 (+)	636	WP_003091163.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
CEK59_RS04845 (CEK59_04810)	-	1009833..1010273 (+)	441	WP_003091161.1	biopolymer transporter ExbD	-
CEK59_RS04850 (CEK59_04815)	lpxK	1010273..1011271 (+)	999	WP_003130692.1	tetraacyldisaccharide 4'-kinase	-
CEK59_RS04855 (CEK59_04820)	-	1011309..1011494 (+)	186	WP_003091157.1	Trm112 family protein	-
CEK59_RS04860 (CEK59_04825)	kdsB	1011494..1012258 (+)	765	WP_003091155.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
CEK59_RS04865 (CEK59_04830)	-	1012258..1012722 (+)	465	WP_003106924.1	low molecular weight protein-tyrosine-phosphatase	-
CEK59_RS04870 (CEK59_04835)	murB	1012719..1013744 (+)	1026	WP_058160225.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 79951.58 Da
• Isoelectric Point: 10.3506

>NTDB_id=239934 CEK59_RS04835 WP_058160226.1 1006903..1009128(+) (comA) [Pseudomonas aeruginosa strain LW]
MRLGLPALAAGLLALRFLAELPSVGWLLGMAAAGLLLLFGRLYWLGLFLLGFAWACGSAQVALDGRLAAELDGRTLWLEG
RVVDLPASGEGVTRFRLEEVSAARGVLLPERLRLSWRGAPPLMGGERWRLAVTLKRPRGLVNAAGFDYEAWLLAQRVGAV
GTVKAGQRLQPASGLDAWRDAWRQRLLAVDAQGRGAALAALVLGDGSGLSAAEWRMFQDTGTVHLMVISGSHISLLAGML
YGLVAALHRLGCWPRRLPWLPCACALGLLGAWSYGLMAGFEVPVRRACLMVSLALVWRLRFRHLGLLTPLLATLVLVLLV
EPLASLQAGFWLSFLAVALLLWLFAGRLGRWRWWAAWGRAQWGMALGLAMPLLALGLPLSLSGALANLLAVPWIELLVVP
PALAGSLLLWVPGLGEGLLRAAGVSLDLLFRALGLLAGLAEAWQPPAAAAWSVALGMLGALCWLAPAGLPLRALGAALLL
PALLPSSPPVEWGRAEVRVLDVGQGLAVLVRTREHALLYDSGARQGAFDMGERVVVPVLRSLDLRRLDGLLLSHADNDHA
GGAPTVASRFPPGWLVSGEPARLPSPLFADSCDERRWSWDGVVFEQWAWAQAGDSNDRSCVLRVEADGEVLLLTGDISRA
AEHAWLARQADPRVDWLLAPHHGSRSSSGVAFVLRTRPLHVLVSRGWRNAFGHPHGEVMERYARVAAQVHDTARDGALTF
LLGSRGGARRERDSAHFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=239934 CEK59_RS04835 WP_058160226.1 1006903..1009128(+) (comA) [Pseudomonas aeruginosa strain LW]
ATGCGCCTGGGATTGCCAGCCCTCGCCGCGGGGCTGCTGGCCCTGCGCTTCCTGGCGGAATTGCCGTCGGTCGGCTGGCT
GCTGGGCATGGCCGCCGCCGGACTGTTGCTGCTGTTCGGCCGGCTGTACTGGCTGGGGTTGTTCCTGCTCGGGTTCGCCT
GGGCCTGCGGCTCGGCGCAAGTCGCCCTGGACGGACGCCTGGCCGCCGAGCTGGATGGTCGCACCCTTTGGCTGGAGGGG
CGTGTGGTCGATCTGCCGGCGAGCGGCGAGGGCGTCACGCGCTTCCGGCTGGAGGAGGTCAGCGCTGCGCGGGGCGTGCT
TCTTCCCGAGCGTCTGCGCCTGAGCTGGCGCGGCGCGCCGCCGCTGATGGGCGGCGAACGCTGGCGCCTGGCGGTGACCC
TGAAACGCCCCCGCGGCCTGGTGAACGCGGCGGGTTTCGACTACGAGGCCTGGTTGTTGGCGCAGCGGGTCGGTGCCGTG
GGCACGGTGAAGGCGGGCCAACGCCTGCAGCCGGCCAGCGGCCTGGATGCCTGGCGCGACGCCTGGCGCCAACGCCTCCT
GGCGGTCGACGCACAGGGGCGCGGCGCCGCCCTGGCGGCGCTGGTGCTGGGGGATGGCTCGGGATTGAGCGCAGCCGAGT
GGCGCATGTTCCAGGACACCGGCACCGTGCATCTGATGGTCATCTCCGGTTCGCATATCTCGTTGCTGGCGGGGATGCTC
TATGGCCTGGTGGCGGCCTTGCATCGCCTGGGCTGCTGGCCGCGGCGCCTGCCCTGGCTGCCCTGTGCCTGCGCCCTGGG
TTTGCTTGGTGCCTGGAGCTACGGGTTGATGGCGGGTTTCGAGGTCCCGGTGCGGCGCGCCTGCCTGATGGTCAGCCTGG
CGCTGGTCTGGCGCCTGCGTTTCCGCCACCTGGGCTTGCTGACCCCGCTGCTGGCAACGCTGGTGCTGGTCTTGCTGGTC
GAGCCGCTGGCCAGCCTGCAGGCGGGGTTCTGGCTGTCGTTCCTGGCGGTTGCCCTGCTGCTCTGGCTGTTCGCCGGGCG
CCTTGGGCGCTGGCGCTGGTGGGCGGCCTGGGGGCGGGCGCAGTGGGGGATGGCGCTGGGGCTGGCGATGCCGCTGCTGG
CGCTGGGCCTGCCGTTGAGCCTGAGCGGAGCGCTGGCCAACCTGCTGGCGGTGCCTTGGATCGAACTGCTGGTAGTGCCC
CCGGCCCTGGCGGGGAGCCTGCTGCTGTGGGTGCCCGGGCTGGGCGAGGGGCTGCTTCGCGCCGCTGGCGTTTCGCTGGA
CCTGCTGTTTCGTGCGCTTGGCCTGCTGGCAGGCCTGGCCGAGGCCTGGCAGCCACCCGCCGCAGCGGCCTGGAGCGTAG
CGCTGGGCATGCTCGGCGCGCTCTGCTGGCTGGCGCCGGCTGGCTTGCCGTTGCGTGCCCTCGGTGCCGCGTTGCTACTG
CCGGCATTGTTGCCGTCATCGCCGCCTGTCGAATGGGGGCGGGCGGAAGTGAGGGTGCTGGACGTCGGCCAGGGGCTGGC
CGTGCTGGTGCGTACCCGGGAGCATGCCTTGCTCTATGACAGCGGTGCGCGGCAGGGGGCGTTCGACATGGGCGAGCGGG
TGGTGGTGCCGGTGCTGCGTAGTCTGGACCTGCGGCGTCTGGACGGCCTGTTGCTGAGTCATGCCGACAACGACCATGCA
GGCGGTGCTCCTACGGTCGCTTCCCGATTCCCGCCGGGTTGGCTGGTCAGCGGCGAACCCGCGCGCCTGCCTTCGCCGTT
GTTCGCGGACAGCTGCGACGAGCGGCGCTGGTCCTGGGATGGCGTGGTTTTCGAACAGTGGGCATGGGCGCAGGCCGGCG
ACAGCAACGACCGCTCCTGCGTGCTGAGGGTCGAGGCCGATGGCGAAGTCCTGCTGCTGACCGGGGACATCTCGCGTGCG
GCCGAGCATGCCTGGCTGGCGCGACAGGCCGATCCGCGGGTCGACTGGTTGCTGGCGCCGCATCACGGCAGCCGCAGCTC
CTCCGGAGTCGCCTTCGTGTTGCGTACGCGGCCTCTCCATGTGCTGGTCTCGCGAGGTTGGCGCAACGCCTTCGGCCATC
CCCATGGCGAAGTGATGGAGCGTTACGCGAGGGTCGCCGCGCAGGTCCACGACACGGCGCGCGACGGTGCCCTGACGTTT
CTCCTCGGAAGCCGTGGCGGTGCACGCCGGGAGCGTGATTCGGCGCACTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-659)

• Domain of unknown function (DUF4131) (DUF4131) (21-168)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.362	97.301	0.578
comA	Ralstonia pseudosolanacearum GMI1000	35.742	100	0.367