Detailed information NTG0023980

Bioinformatically predicted

Overview

• Name: spo0J
• Type: Regulator
• Locus tag: TRNA_RS42980
• Genome accession: NC_006270
• Coordinates: 4211732..4212580 (-)
• Length: 282 a.a.
• NCBI ID: WP_003178034.1
• Uniprot ID: Q65CN8
• Organism: Bacillus licheniformis DSM 13 = ATCC 14580
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4206732..4217580

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TRNA_RS42940 (BL00098)	rpsR	4206937..4207176 (-)	240	WP_003178022.1	30S ribosomal protein S18	-
TRNA_RS42945 (BL00099)	ssbA	4207228..4207740 (-)	513	WP_003178024.1	single-stranded DNA-binding protein SsbA	Machinery gene
TRNA_RS42950 (BL00100)	rpsF	4207787..4208074 (-)	288	WP_003178026.1	30S ribosomal protein S6	-
TRNA_RS42955 (BL00101)	ychF	4208188..4209288 (-)	1101	WP_003178027.1	redox-regulated ATPase YchF	-
TRNA_RS42965 (BL05397)	-	4209467..4209673 (-)	207	WP_011201785.1	DUF951 domain-containing protein	-
TRNA_RS42970 (BL00102)	-	4209761..4210774 (-)	1014	WP_003178030.1	hypothetical protein	-
TRNA_RS42975 (BL00091)	yyaC	4211078..4211695 (+)	618	WP_003178032.1	spore protease YyaC	-
TRNA_RS42980 (BL00103)	spo0J	4211732..4212580 (-)	849	WP_003178034.1	ParB/RepB/Spo0J family partition protein	Regulator
TRNA_RS42985 (BL00104)	soj	4212573..4213334 (-)	762	WP_011201786.1	sporulation initiation inhibitor protein Soj	-
TRNA_RS42990 (BL00105)	-	4213577..4214020 (-)	444	WP_003178038.1	carboxymuconolactone decarboxylase family protein	-
TRNA_RS42995 (BL00106)	-	4214087..4214944 (-)	858	WP_003178040.1	RNA polymerase sigma-70 factor	-
TRNA_RS43000 (BL00107)	noc	4215000..4215851 (-)	852	WP_003178042.1	nucleoid occlusion protein	-
TRNA_RS43005 (BL00108)	rsmG	4215949..4216668 (-)	720	WP_003178044.1	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 32283.41 Da
• Isoelectric Point: 9.5628

>NTDB_id=23980 TRNA_RS42980 WP_003178034.1 4211732..4212580(-) (spo0J) [Bacillus licheniformis DSM 13 = ATCC 14580]
MPKGLGKGINALFSNVDLSEETVEEIKLQDLRPNPYQPRKTFDDQSLKDLKESILQHGVLQPIIVRKSIKGYDIVAGERR
FRAAEKAGLETIPAIVRELSESLMMEIALLENLQREDLSPLEEAKAYESLLKHLDMTQEQLAKRLGKSRPHIANHLRLLT
LPEDVQKLIDNGTLSMGHGRTLLGLKNKKKLEPLVQKVVSEQLNVRQLEKLIQQLNADVPRETKKPKQVKDAVIKERESY
LRNYFGTPVTIKKQKKKGRIEIEFYSNEDLERILELLAQEDA

Nucleotide

• Length: 849 bp

>NTDB_id=23980 TRNA_RS42980 WP_003178034.1 4211732..4212580(-) (spo0J) [Bacillus licheniformis DSM 13 = ATCC 14580]
ATGCCTAAAGGTCTCGGAAAAGGGATTAATGCATTGTTTTCAAATGTTGATTTATCCGAAGAAACGGTTGAGGAAATCAA
GCTGCAAGACTTGCGGCCCAACCCTTATCAGCCAAGAAAAACGTTTGATGACCAATCGTTAAAAGATTTGAAGGAGTCCA
TTTTGCAGCACGGTGTTTTGCAGCCCATCATCGTCAGAAAGTCAATTAAAGGCTATGACATTGTGGCCGGAGAACGCCGT
TTCCGGGCTGCTGAAAAGGCCGGATTGGAAACCATTCCTGCGATTGTGCGCGAGCTGTCGGAATCCCTGATGATGGAGAT
TGCCCTATTGGAAAATCTTCAACGAGAAGACCTGTCTCCGCTTGAAGAAGCAAAAGCCTATGAATCTTTGCTCAAACATC
TCGATATGACCCAGGAACAGCTGGCGAAAAGGCTTGGAAAAAGCAGGCCTCACATCGCCAACCACTTGCGGCTGCTGACA
CTTCCTGAAGACGTTCAAAAGTTAATCGACAACGGCACGTTATCGATGGGCCATGGCCGAACATTGCTTGGATTGAAAAA
CAAGAAAAAGCTTGAGCCGCTTGTTCAAAAGGTCGTGTCCGAACAGTTGAACGTCCGCCAGTTGGAAAAGTTAATTCAAC
AGTTGAACGCTGATGTTCCACGTGAAACAAAGAAGCCGAAACAAGTCAAAGATGCAGTGATCAAGGAACGGGAATCGTAT
TTGCGAAACTATTTTGGAACACCGGTGACCATTAAAAAGCAAAAGAAAAAAGGCAGGATCGAAATCGAATTCTACTCAAA
TGAAGACTTGGAGCGTATTCTCGAATTATTGGCTCAAGAAGACGCATAA

Domains

Predicted by InterProScan.

• ParB/Sulfiredoxin domain (ParB_N) (24-112)

• HTH domain found in ParB protein (HTH_ParB) (163-214)

3D structure

• AlphaFold DB: Q65CN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
spo0J	Streptococcus mutans UA159	43.462	92.199	0.401