Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | CG419_RS03645 | Genome accession | NZ_CP022474 |
| Coordinates | 729112..730113 (+) | Length | 333 a.a. |
| NCBI ID | WP_089556485.1 | Uniprot ID | A0AAC9UNN1 |
| Organism | Latilactobacillus curvatus strain MRS6 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 724112..735113
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG419_RS03605 (CG419_03605) | - | 724290..725303 (+) | 1014 | WP_089556482.1 | YeiH family protein | - |
| CG419_RS03610 (CG419_03610) | - | 725394..725633 (-) | 240 | WP_004270892.1 | cytochrome b5 domain-containing protein | - |
| CG419_RS03615 (CG419_03615) | - | 725826..726161 (+) | 336 | WP_089556483.1 | hypothetical protein | - |
| CG419_RS03625 (CG419_03625) | - | 726342..726719 (-) | 378 | WP_039099519.1 | hypothetical protein | - |
| CG419_RS03630 (CG419_03630) | - | 726822..727322 (+) | 501 | WP_004270893.1 | VanZ family protein | - |
| CG419_RS03635 (CG419_03635) | - | 727412..728143 (+) | 732 | WP_004270897.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| CG419_RS03640 (CG419_03640) | comGA | 728247..729122 (+) | 876 | WP_089556484.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CG419_RS03645 (CG419_03645) | comGB | 729112..730113 (+) | 1002 | WP_089556485.1 | type II secretion system F family protein | Machinery gene |
| CG419_RS03650 (CG419_03650) | comGC | 730110..730418 (+) | 309 | WP_004270901.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| CG419_RS03655 (CG419_03655) | - | 730450..730842 (+) | 393 | WP_157776705.1 | hypothetical protein | - |
| CG419_RS10460 | - | 730907..731134 (+) | 228 | WP_167371741.1 | hypothetical protein | - |
| CG419_RS03660 (CG419_03660) | - | 731082..731585 (+) | 504 | WP_167371766.1 | competence type IV pilus minor pilin ComGF | - |
| CG419_RS03665 (CG419_03665) | - | 731563..731886 (+) | 324 | WP_039099486.1 | hypothetical protein | - |
| CG419_RS03670 (CG419_03670) | - | 732002..733021 (+) | 1020 | WP_338417482.1 | class I SAM-dependent methyltransferase | - |
| CG419_RS03675 (CG419_03675) | - | 733043..734236 (+) | 1194 | WP_089556488.1 | acetate kinase | - |
| CG419_RS03680 (CG419_03680) | - | 734296..734748 (+) | 453 | WP_089556489.1 | laaL | - |
Sequence
Protein
Download Length: 333 a.a. Molecular weight: 37823.07 Da Isoelectric Point: 9.6278
>NTDB_id=239796 CG419_RS03645 WP_089556485.1 729112..730113(+) (comGB) [Latilactobacillus curvatus strain MRS6]
MKIKTTVQFNTDFLLLLGRLLQNGFSLQQALEFMPIVFPTQKQWLHQVQAGLEAGKRLAPSLAAVSFPAHLVAQIELTEL
QGNLGECLLHLGQLQRIQQKRRRELVGVIAYPCFLLLFLGALIGMMQIYLFPEIAQFNPTTSATSPLQLFFRVMGTFVIM
AGALISVYLFRWHRRPLLQRLAAAFRWPFIGKTLQAYYQYCLLFDLATCLNNGLNLAEMHQLTHRLAKTSWLVQLMQQLE
TAVQKGGTLLANLADGVFYPPELQLVLAKGSPLQQMAKEIDLLAVIKYDELQRQLKQKVNWLQPLLFILIGIIIICTYLS
ILLPLYHTMEGIS
MKIKTTVQFNTDFLLLLGRLLQNGFSLQQALEFMPIVFPTQKQWLHQVQAGLEAGKRLAPSLAAVSFPAHLVAQIELTEL
QGNLGECLLHLGQLQRIQQKRRRELVGVIAYPCFLLLFLGALIGMMQIYLFPEIAQFNPTTSATSPLQLFFRVMGTFVIM
AGALISVYLFRWHRRPLLQRLAAAFRWPFIGKTLQAYYQYCLLFDLATCLNNGLNLAEMHQLTHRLAKTSWLVQLMQQLE
TAVQKGGTLLANLADGVFYPPELQLVLAKGSPLQQMAKEIDLLAVIKYDELQRQLKQKVNWLQPLLFILIGIIIICTYLS
ILLPLYHTMEGIS
Nucleotide
Download Length: 1002 bp
>NTDB_id=239796 CG419_RS03645 WP_089556485.1 729112..730113(+) (comGB) [Latilactobacillus curvatus strain MRS6]
ATGAAGATTAAAACCACTGTTCAATTCAATACTGATTTTCTGTTGCTGTTAGGTCGCTTACTGCAAAATGGTTTTTCTTT
ACAACAAGCACTTGAGTTCATGCCGATTGTTTTTCCGACACAAAAGCAGTGGCTGCATCAGGTGCAAGCTGGGTTAGAAG
CAGGAAAACGACTAGCACCAAGCTTAGCGGCGGTTTCGTTTCCAGCACACCTTGTTGCACAGATTGAATTGACTGAGTTG
CAGGGAAACTTAGGCGAGTGTTTGTTACATCTTGGCCAATTACAGCGCATTCAACAGAAACGGCGTAGAGAGTTAGTTGG
CGTAATTGCCTATCCCTGTTTTCTACTCCTTTTTCTCGGGGCGTTGATTGGGATGATGCAGATTTATCTTTTTCCGGAAA
TCGCGCAGTTTAACCCAACAACTTCGGCGACATCACCATTACAACTATTTTTTAGAGTGATGGGGACATTCGTTATTATG
GCTGGTGCTCTGATTAGTGTGTATTTATTCCGTTGGCATCGGCGACCGCTATTACAACGATTGGCGGCGGCATTTAGATG
GCCGTTCATCGGTAAAACGTTGCAGGCTTACTATCAGTATTGCTTATTATTTGATTTAGCGACTTGCCTGAATAATGGCT
TAAACTTGGCCGAAATGCATCAGCTTACACATCGTTTGGCGAAAACGTCGTGGCTCGTACAATTAATGCAACAACTTGAA
ACGGCTGTCCAAAAGGGGGGCACGCTATTAGCGAACTTAGCGGATGGCGTTTTTTATCCACCTGAGCTGCAATTAGTGCT
CGCTAAGGGAAGTCCGTTACAACAGATGGCCAAGGAGATCGATCTGCTTGCAGTCATTAAATACGATGAACTGCAACGGC
AATTGAAACAGAAGGTGAATTGGCTACAACCGCTCTTGTTTATCCTAATTGGGATCATCATTATTTGTACCTATCTCAGT
ATTTTATTACCGCTATATCATACAATGGAGGGAATTTCATGA
ATGAAGATTAAAACCACTGTTCAATTCAATACTGATTTTCTGTTGCTGTTAGGTCGCTTACTGCAAAATGGTTTTTCTTT
ACAACAAGCACTTGAGTTCATGCCGATTGTTTTTCCGACACAAAAGCAGTGGCTGCATCAGGTGCAAGCTGGGTTAGAAG
CAGGAAAACGACTAGCACCAAGCTTAGCGGCGGTTTCGTTTCCAGCACACCTTGTTGCACAGATTGAATTGACTGAGTTG
CAGGGAAACTTAGGCGAGTGTTTGTTACATCTTGGCCAATTACAGCGCATTCAACAGAAACGGCGTAGAGAGTTAGTTGG
CGTAATTGCCTATCCCTGTTTTCTACTCCTTTTTCTCGGGGCGTTGATTGGGATGATGCAGATTTATCTTTTTCCGGAAA
TCGCGCAGTTTAACCCAACAACTTCGGCGACATCACCATTACAACTATTTTTTAGAGTGATGGGGACATTCGTTATTATG
GCTGGTGCTCTGATTAGTGTGTATTTATTCCGTTGGCATCGGCGACCGCTATTACAACGATTGGCGGCGGCATTTAGATG
GCCGTTCATCGGTAAAACGTTGCAGGCTTACTATCAGTATTGCTTATTATTTGATTTAGCGACTTGCCTGAATAATGGCT
TAAACTTGGCCGAAATGCATCAGCTTACACATCGTTTGGCGAAAACGTCGTGGCTCGTACAATTAATGCAACAACTTGAA
ACGGCTGTCCAAAAGGGGGGCACGCTATTAGCGAACTTAGCGGATGGCGTTTTTTATCCACCTGAGCTGCAATTAGTGCT
CGCTAAGGGAAGTCCGTTACAACAGATGGCCAAGGAGATCGATCTGCTTGCAGTCATTAAATACGATGAACTGCAACGGC
AATTGAAACAGAAGGTGAATTGGCTACAACCGCTCTTGTTTATCCTAATTGGGATCATCATTATTTGTACCTATCTCAGT
ATTTTATTACCGCTATATCATACAATGGAGGGAATTTCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Latilactobacillus sakei subsp. sakei 23K |
57.567 |
100 |
0.583 |