Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   C7M23_RS14715 Genome accession   NZ_CP028209
Coordinates   2811141..2813144 (-) Length   667 a.a.
NCBI ID   WP_014476936.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102745     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2806141..2818144
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M23_RS14665 (C7M23_02875) sspO 2806554..2806700 (+) 147 WP_003244839.1 acid-soluble spore protein SspO -
  C7M23_RS14670 (C7M23_02876) sspP 2806732..2806878 (+) 147 WP_003221237.1 small acid-soluble spore protein P -
  C7M23_RS14675 (C7M23_02877) cotM 2806958..2807350 (+) 393 WP_072174018.1 outer spore coat protein CotM -
  C7M23_RS14680 (C7M23_02878) yneK 2807584..2808012 (+) 429 WP_119899455.1 DynA interaction protein YneK -
  C7M23_RS14685 (C7M23_02879) yneJ 2808043..2808534 (-) 492 WP_074794556.1 CcdC family protein -
  C7M23_RS14690 (C7M23_02880) yneI 2808613..2808975 (-) 363 WP_003245707.1 response regulator -
  C7M23_RS14695 (C7M23_02881) ccdA 2809064..2809771 (-) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  C7M23_RS14700 (C7M23_02882) ynzD 2809991..2810164 (+) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  C7M23_RS14705 (C7M23_02883) yneF 2810238..2810456 (-) 219 WP_003221221.1 YneF family protein -
  C7M23_RS14710 (C7M23_02884) sirA 2810542..2810988 (-) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  C7M23_RS14715 (C7M23_02885) recP/tkt 2811141..2813144 (-) 2004 WP_014476936.1 transketolase Machinery gene
  C7M23_RS14720 (C7M23_02886) ynzC 2813313..2813546 (-) 234 WP_003231595.1 DUF896 domain-containing protein -
  C7M23_RS14725 (C7M23_02887) dinL 2813610..2814263 (-) 654 WP_015714011.1 recombinase family protein -
  C7M23_RS14730 (C7M23_02888) yneA 2814282..2814599 (-) 318 WP_003231598.1 cell division suppressor protein YneA -
  C7M23_RS14735 (C7M23_02889) dinR/lexA 2814749..2815366 (+) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  C7M23_RS21230 - 2815653..2815995 (-) 343 Protein_2877 hypothetical protein -
  C7M23_RS14740 (C7M23_02890) fosM 2815904..2816338 (-) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  C7M23_RS14745 (C7M23_02891) - 2816546..2816995 (+) 450 WP_003245454.1 YndM family protein -
  C7M23_RS14750 (C7M23_02892) pghL 2817022..2817780 (-) 759 WP_119899451.1 gamma-polyglutamate hydrolase PghL -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72300.39 Da        Isoelectric Point: 4.7291

>NTDB_id=239779 C7M23_RS14715 WP_014476936.1 2811141..2813144(-) (recP/tkt) [Bacillus subtilis strain SRCM102745]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTAEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=239779 C7M23_RS14715 WP_014476936.1 2811141..2813144(-) (recP/tkt) [Bacillus subtilis strain SRCM102745]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACTACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGATCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACAGCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATTGCCTCCGGA
TCCGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCTGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562