Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   C7M23_RS14735 Genome accession   NZ_CP028209
Coordinates   2814749..2815366 (+) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain SRCM102745     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2809749..2820366
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M23_RS14700 (C7M23_02882) ynzD 2809991..2810164 (+) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  C7M23_RS14705 (C7M23_02883) yneF 2810238..2810456 (-) 219 WP_003221221.1 YneF family protein -
  C7M23_RS14710 (C7M23_02884) sirA 2810542..2810988 (-) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  C7M23_RS14715 (C7M23_02885) recP/tkt 2811141..2813144 (-) 2004 WP_014476936.1 transketolase Machinery gene
  C7M23_RS14720 (C7M23_02886) ynzC 2813313..2813546 (-) 234 WP_003231595.1 DUF896 domain-containing protein -
  C7M23_RS14725 (C7M23_02887) dinL 2813610..2814263 (-) 654 WP_015714011.1 recombinase family protein -
  C7M23_RS14730 (C7M23_02888) yneA 2814282..2814599 (-) 318 WP_003231598.1 cell division suppressor protein YneA -
  C7M23_RS14735 (C7M23_02889) dinR/lexA 2814749..2815366 (+) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  C7M23_RS21230 - 2815653..2815995 (-) 343 Protein_2877 hypothetical protein -
  C7M23_RS14740 (C7M23_02890) fosM 2815904..2816338 (-) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  C7M23_RS14745 (C7M23_02891) - 2816546..2816995 (+) 450 WP_003245454.1 YndM family protein -
  C7M23_RS14750 (C7M23_02892) pghL 2817022..2817780 (-) 759 WP_119899451.1 gamma-polyglutamate hydrolase PghL -
  C7M23_RS14755 (C7M23_02893) - 2818004..2818318 (-) 315 WP_201757448.1 hypothetical protein -
  C7M23_RS14760 (C7M23_02894) yndJ 2818396..2820036 (-) 1641 WP_131227464.1 YndJ family protein -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=239780 C7M23_RS14735 WP_003238209.1 2814749..2815366(+) (dinR/lexA) [Bacillus subtilis strain SRCM102745]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=239780 C7M23_RS14735 WP_003238209.1 2814749..2815366(+) (dinR/lexA) [Bacillus subtilis strain SRCM102745]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment