Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M23_RS06890 Genome accession   NZ_CP028209
Coordinates   1327775..1328488 (+) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis strain SRCM102745     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1322775..1333488
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M23_RS06855 (C7M23_01347) rppI 1323021..1323497 (+) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -
  C7M23_RS06860 (C7M23_01348) rapZ 1323522..1324409 (+) 888 WP_003243903.1 RNase adapter RapZ -
  C7M23_RS06865 (C7M23_01349) mgfK 1324411..1325364 (+) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  C7M23_RS06870 (C7M23_01350) whiA 1325387..1326337 (+) 951 WP_003243775.1 DNA-binding protein WhiA -
  C7M23_RS06875 (C7M23_01351) crh 1326361..1326618 (+) 258 WP_003219835.1 HPr family phosphocarrier protein -
  C7M23_RS06880 (C7M23_01352) yvcN 1326619..1327383 (+) 765 WP_072692779.1 arylamine N-acetyltransferase -
  C7M23_RS06885 (C7M23_01353) yvzJ 1327419..1327628 (-) 210 WP_003243327.1 lipoprotein -
  C7M23_RS06890 (C7M23_01354) braR 1327775..1328488 (+) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  C7M23_RS06895 (C7M23_01355) psdS 1328482..1329552 (+) 1071 WP_160243191.1 two-component sensor histidine kinase PsdS -
  C7M23_RS06900 (C7M23_01356) psdA 1329635..1330414 (+) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  C7M23_RS06905 (C7M23_01357) psdB 1330389..1332329 (+) 1941 WP_032726921.1 lantibiotic ABC transporter permease PsdB -
  C7M23_RS06910 (C7M23_01358) ghrB 1332367..1333344 (-) 978 WP_131228141.1 D-glycerate dehydrogenase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=239726 C7M23_RS06890 WP_003244535.1 1327775..1328488(+) (braR) [Bacillus subtilis strain SRCM102745]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=239726 C7M23_RS06890 WP_003244535.1 1327775..1328488(+) (braR) [Bacillus subtilis strain SRCM102745]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAACCGTTCCATTTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCGTCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment