Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | CG015_RS06235 | Genome accession | NZ_CP022468 |
| Coordinates | 1348652..1348951 (+) | Length | 99 a.a. |
| NCBI ID | WP_017044597.1 | Uniprot ID | A0A233HCF5 |
| Organism | Vibrio anguillarum strain MHK3 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1343652..1353951
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG015_RS06220 (CG015_06220) | lon | 1343679..1346030 (+) | 2352 | WP_129532411.1 | endopeptidase La | - |
| CG015_RS06225 (CG015_06225) | - | 1346226..1346498 (+) | 273 | WP_026027116.1 | HU family DNA-binding protein | - |
| CG015_RS06230 (CG015_06230) | ppiD | 1346656..1348515 (+) | 1860 | WP_129532412.1 | peptidylprolyl isomerase | - |
| CG015_RS06235 (CG015_06235) | comEA | 1348652..1348951 (+) | 300 | WP_017044597.1 | ComEA family DNA-binding protein | Machinery gene |
| CG015_RS06240 (CG015_06240) | cmk | 1349115..1349795 (+) | 681 | WP_013857180.1 | (d)CMP kinase | - |
| CG015_RS06245 (CG015_06245) | rpsA | 1349899..1351569 (+) | 1671 | WP_013857179.1 | 30S ribosomal protein S1 | - |
| CG015_RS06250 (CG015_06250) | ihfB | 1351646..1351930 (+) | 285 | WP_010317449.1 | integration host factor subunit beta | - |
| CG015_RS06255 (CG015_06255) | - | 1352072..1352347 (+) | 276 | WP_017044598.1 | LapA family protein | - |
| CG015_RS06260 (CG015_06260) | lapB | 1352367..1353536 (+) | 1170 | WP_026028046.1 | lipopolysaccharide assembly protein LapB | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10776.69 Da Isoelectric Point: 9.6909
>NTDB_id=239723 CG015_RS06235 WP_017044597.1 1348652..1348951(+) (comEA) [Vibrio anguillarum strain MHK3]
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAATVRQNAERIIL
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAATVRQNAERIIL
Nucleotide
Download Length: 300 bp
>NTDB_id=239723 CG015_RS06235 WP_017044597.1 1348652..1348951(+) (comEA) [Vibrio anguillarum strain MHK3]
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGCTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGCTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
60.194 |
100 |
0.626 |
| comEA | Vibrio cholerae strain A1552 |
60.194 |
100 |
0.626 |
| comEA | Vibrio campbellii strain DS40M4 |
59.184 |
98.99 |
0.586 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
60 |
90.909 |
0.545 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
40.179 |
100 |
0.455 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
40.909 |
100 |
0.455 |
| comEA | Legionella pneumophila str. Paris |
36.735 |
98.99 |
0.364 |
| comEA | Legionella pneumophila strain ERS1305867 |
36.735 |
98.99 |
0.364 |