Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   C7M23_RS03250 Genome accession   NZ_CP028209
Coordinates   621522..622349 (-) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain SRCM102745     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 616522..627349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M23_RS03225 (C7M23_00636) abrB 618868..619158 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  C7M23_RS03230 (C7M23_00637) rsmI 619207..620085 (-) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  C7M23_RS03235 (C7M23_00638) yazA 620060..620359 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  C7M23_RS03240 (C7M23_00639) trmNF 620346..621089 (-) 744 WP_003226765.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  C7M23_RS03245 (C7M23_00640) yabA 621148..621507 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  C7M23_RS03250 (C7M23_00641) yaaT 621522..622349 (-) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  C7M23_RS03255 (C7M23_00642) holB 622352..623341 (-) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  C7M23_RS03260 (C7M23_00643) yaaR 623353..623793 (-) 441 WP_009966249.1 YaaR family protein -
  C7M23_RS03265 (C7M23_00644) darA 623806..624135 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  C7M23_RS03270 (C7M23_00645) tmk 624209..624847 (-) 639 WP_003226776.1 dTMP kinase -
  C7M23_RS03275 (C7M23_00646) efpO 624844..626286 (-) 1443 WP_003226777.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=239702 C7M23_RS03250 WP_003226767.1 621522..622349(-) (yaaT) [Bacillus subtilis strain SRCM102745]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=239702 C7M23_RS03250 WP_003226767.1 621522..622349(-) (yaaT) [Bacillus subtilis strain SRCM102745]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996