Detailed information
Bioinformatically predicted
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | CGC65_RS12425 | Genome accession | NZ_CP022464 |
| Coordinates | 2661313..2662701 (+) | Length | 462 a.a. |
| NCBI ID | WP_002573498.1 | Uniprot ID | A0A412Z111 |
| Organism | Enterocloster bolteae strain ATCC BAA-613 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2656313..2667701
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGC65_RS12405 (CGC65_12395) | - | 2656382..2656999 (+) | 618 | WP_002567197.1 | UvrB/UvrC motif-containing protein | - |
| CGC65_RS12410 (CGC65_12400) | - | 2656992..2658026 (+) | 1035 | WP_002567198.1 | ATP--guanido phosphotransferase | - |
| CGC65_RS12415 (CGC65_12405) | - | 2658080..2660689 (+) | 2610 | WP_002567199.1 | ATP-dependent Clp protease ATP-binding subunit | - |
| CGC65_RS12420 (CGC65_12410) | - | 2660808..2661224 (+) | 417 | WP_002567200.1 | hypothetical protein | - |
| CGC65_RS12425 (CGC65_12415) | radA | 2661313..2662701 (+) | 1389 | WP_002573498.1 | DNA repair protein RadA | Machinery gene |
Sequence
Protein
Download Length: 462 a.a. Molecular weight: 49969.49 Da Isoelectric Point: 5.4314
>NTDB_id=239668 CGC65_RS12425 WP_002573498.1 2661313..2662701(+) (radA) [Enterocloster bolteae strain ATCC BAA-613]
MAKARTTAFFCKECGYESSKWMGQCPACKAWNSMVEEPVSKPSGSQGGLGRLASGSQKSPVPAARPSLLSEIDIEEQDRI
STGFGELDRVLGDGIVAGSLVLVGGDPGIGKSTLLLQVCRNLAGAGQRVLYISGEESLKQIKMRANRIGPVTGELKFLCE
TSLEHIERAIDTENPQIAVIDSIQTMYREEISSAPGSVSQVRESTGILMQIAKSRGIAIFVVGHVTKEGVVAGPRVLEHM
VDTVLYFEGDRNASYRILRSVKNRFGSTNEIGVFEMQEQGLAEVENPSEYMLDGRPEEASGAVVSCSFEGTRPILLEVQA
LVTETNFGMPRRTAAGTDYNRVNLLMAVLEKRCRYEMSRLDAYVNIAGGMKMNEPALDLAIIMALMSSYKDRPVDPKMLI
FGEVGLSGEVRAVSQASQRVNEAAKLGFTACVLPSVCADKMKPVEGIRLIGVSNVREAIGIM
MAKARTTAFFCKECGYESSKWMGQCPACKAWNSMVEEPVSKPSGSQGGLGRLASGSQKSPVPAARPSLLSEIDIEEQDRI
STGFGELDRVLGDGIVAGSLVLVGGDPGIGKSTLLLQVCRNLAGAGQRVLYISGEESLKQIKMRANRIGPVTGELKFLCE
TSLEHIERAIDTENPQIAVIDSIQTMYREEISSAPGSVSQVRESTGILMQIAKSRGIAIFVVGHVTKEGVVAGPRVLEHM
VDTVLYFEGDRNASYRILRSVKNRFGSTNEIGVFEMQEQGLAEVENPSEYMLDGRPEEASGAVVSCSFEGTRPILLEVQA
LVTETNFGMPRRTAAGTDYNRVNLLMAVLEKRCRYEMSRLDAYVNIAGGMKMNEPALDLAIIMALMSSYKDRPVDPKMLI
FGEVGLSGEVRAVSQASQRVNEAAKLGFTACVLPSVCADKMKPVEGIRLIGVSNVREAIGIM
Nucleotide
Download Length: 1389 bp
>NTDB_id=239668 CGC65_RS12425 WP_002573498.1 2661313..2662701(+) (radA) [Enterocloster bolteae strain ATCC BAA-613]
ATGGCAAAAGCGAGAACCACCGCATTTTTCTGTAAGGAATGCGGATATGAATCATCCAAATGGATGGGGCAGTGTCCTGC
CTGCAAGGCCTGGAATTCCATGGTGGAGGAACCGGTATCAAAACCGTCAGGCAGCCAGGGCGGGTTAGGGCGCCTGGCTT
CGGGGAGCCAGAAATCCCCGGTTCCGGCAGCCAGACCATCTCTTCTGTCAGAGATTGACATAGAGGAGCAGGACCGTATA
TCCACTGGTTTTGGGGAACTGGACCGGGTGCTGGGAGACGGAATCGTGGCCGGCTCCCTGGTGCTGGTGGGGGGAGACCC
GGGTATCGGAAAATCCACCCTTTTGCTTCAGGTATGCCGGAATCTGGCGGGCGCAGGCCAGCGGGTTCTGTACATATCAG
GGGAGGAATCCTTAAAACAGATTAAGATGAGGGCAAACCGCATCGGTCCTGTGACCGGAGAGCTGAAATTCCTGTGTGAG
ACAAGCCTGGAGCATATTGAGAGGGCCATTGACACTGAGAATCCCCAGATTGCAGTCATTGACTCCATACAGACCATGTA
CAGGGAGGAGATATCCTCTGCTCCCGGAAGCGTCAGCCAGGTAAGGGAGTCCACAGGAATCCTGATGCAGATAGCAAAGA
GCCGGGGAATCGCCATTTTTGTGGTGGGGCATGTGACAAAGGAAGGCGTGGTGGCAGGCCCCAGGGTACTGGAACATATG
GTGGATACGGTACTCTATTTTGAGGGAGACAGGAATGCGTCCTACCGCATTCTGCGCAGTGTGAAAAACCGGTTTGGATC
TACCAATGAGATAGGTGTATTTGAGATGCAGGAACAGGGGCTGGCAGAGGTGGAGAATCCCTCTGAATACATGCTGGACG
GCCGGCCGGAGGAAGCCTCGGGCGCAGTGGTATCCTGTTCCTTTGAGGGCACCAGGCCCATCCTTTTAGAGGTACAGGCC
CTGGTGACGGAAACGAATTTCGGTATGCCCAGGCGGACGGCGGCCGGTACGGATTACAACCGTGTGAACCTGCTGATGGC
AGTGCTGGAGAAGCGCTGCCGCTATGAGATGTCGCGGCTGGATGCCTATGTGAATATAGCGGGAGGCATGAAGATGAACG
AGCCAGCCCTGGATCTGGCCATTATCATGGCCCTTATGTCCAGCTACAAGGACCGGCCCGTGGATCCGAAAATGCTCATA
TTCGGGGAGGTGGGCTTGTCAGGAGAGGTCAGGGCCGTATCCCAGGCCAGCCAGCGTGTGAATGAGGCTGCCAAGCTGGG
CTTTACCGCCTGTGTGCTGCCGAGCGTATGCGCGGATAAGATGAAGCCTGTGGAGGGCATACGTTTGATTGGGGTGTCCA
ATGTGCGGGAGGCTATTGGAATCATGTAA
ATGGCAAAAGCGAGAACCACCGCATTTTTCTGTAAGGAATGCGGATATGAATCATCCAAATGGATGGGGCAGTGTCCTGC
CTGCAAGGCCTGGAATTCCATGGTGGAGGAACCGGTATCAAAACCGTCAGGCAGCCAGGGCGGGTTAGGGCGCCTGGCTT
CGGGGAGCCAGAAATCCCCGGTTCCGGCAGCCAGACCATCTCTTCTGTCAGAGATTGACATAGAGGAGCAGGACCGTATA
TCCACTGGTTTTGGGGAACTGGACCGGGTGCTGGGAGACGGAATCGTGGCCGGCTCCCTGGTGCTGGTGGGGGGAGACCC
GGGTATCGGAAAATCCACCCTTTTGCTTCAGGTATGCCGGAATCTGGCGGGCGCAGGCCAGCGGGTTCTGTACATATCAG
GGGAGGAATCCTTAAAACAGATTAAGATGAGGGCAAACCGCATCGGTCCTGTGACCGGAGAGCTGAAATTCCTGTGTGAG
ACAAGCCTGGAGCATATTGAGAGGGCCATTGACACTGAGAATCCCCAGATTGCAGTCATTGACTCCATACAGACCATGTA
CAGGGAGGAGATATCCTCTGCTCCCGGAAGCGTCAGCCAGGTAAGGGAGTCCACAGGAATCCTGATGCAGATAGCAAAGA
GCCGGGGAATCGCCATTTTTGTGGTGGGGCATGTGACAAAGGAAGGCGTGGTGGCAGGCCCCAGGGTACTGGAACATATG
GTGGATACGGTACTCTATTTTGAGGGAGACAGGAATGCGTCCTACCGCATTCTGCGCAGTGTGAAAAACCGGTTTGGATC
TACCAATGAGATAGGTGTATTTGAGATGCAGGAACAGGGGCTGGCAGAGGTGGAGAATCCCTCTGAATACATGCTGGACG
GCCGGCCGGAGGAAGCCTCGGGCGCAGTGGTATCCTGTTCCTTTGAGGGCACCAGGCCCATCCTTTTAGAGGTACAGGCC
CTGGTGACGGAAACGAATTTCGGTATGCCCAGGCGGACGGCGGCCGGTACGGATTACAACCGTGTGAACCTGCTGATGGC
AGTGCTGGAGAAGCGCTGCCGCTATGAGATGTCGCGGCTGGATGCCTATGTGAATATAGCGGGAGGCATGAAGATGAACG
AGCCAGCCCTGGATCTGGCCATTATCATGGCCCTTATGTCCAGCTACAAGGACCGGCCCGTGGATCCGAAAATGCTCATA
TTCGGGGAGGTGGGCTTGTCAGGAGAGGTCAGGGCCGTATCCCAGGCCAGCCAGCGTGTGAATGAGGCTGCCAAGCTGGG
CTTTACCGCCTGTGTGCTGCCGAGCGTATGCGCGGATAAGATGAAGCCTGTGGAGGGCATACGTTTGATTGGGGTGTCCA
ATGTGCGGGAGGCTATTGGAATCATGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Bacillus subtilis subsp. subtilis str. 168 |
56.304 |
99.567 |
0.561 |
| radA | Streptococcus mitis NCTC 12261 |
51.634 |
99.351 |
0.513 |
| radA | Streptococcus mitis SK321 |
51.634 |
99.351 |
0.513 |
| radA | Streptococcus pneumoniae Rx1 |
51.416 |
99.351 |
0.511 |
| radA | Streptococcus pneumoniae D39 |
51.416 |
99.351 |
0.511 |
| radA | Streptococcus pneumoniae R6 |
51.416 |
99.351 |
0.511 |
| radA | Streptococcus pneumoniae TIGR4 |
51.416 |
99.351 |
0.511 |