Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | CGZ63_RS21905 | Genome accession | NZ_CP022445 |
| Coordinates | 4130721..4131764 (-) | Length | 347 a.a. |
| NCBI ID | WP_089607630.1 | Uniprot ID | - |
| Organism | Bacillus cereus C1L | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4125721..4136764
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGZ63_RS21860 | - | 4126154..4126354 (-) | 201 | WP_000106083.1 | YqzE family protein | - |
| CGZ63_RS21865 | - | 4126393..4126890 (-) | 498 | WP_089607627.1 | shikimate kinase | - |
| CGZ63_RS21870 | - | 4127006..4127656 (-) | 651 | WP_000183857.1 | 2OG-Fe(II) oxygenase | - |
| CGZ63_RS21875 | comGG | 4127831..4128202 (-) | 372 | WP_089607628.1 | competence type IV pilus minor pilin ComGG | - |
| CGZ63_RS21880 | comGF | 4128199..4128669 (-) | 471 | WP_000923101.1 | competence type IV pilus minor pilin ComGF | - |
| CGZ63_RS21885 | - | 4128639..4128941 (-) | 303 | WP_100249631.1 | competence protein ComG | - |
| CGZ63_RS21890 | comGD | 4128934..4129389 (-) | 456 | WP_000813141.1 | competence type IV pilus minor pilin ComGD | - |
| CGZ63_RS21895 | comGC | 4129386..4129685 (-) | 300 | WP_001178687.1 | competence type IV pilus major pilin ComGC | - |
| CGZ63_RS21900 | comGB | 4129697..4130734 (-) | 1038 | WP_100249632.1 | competence type IV pilus assembly protein ComGB | - |
| CGZ63_RS21905 | comGA | 4130721..4131764 (-) | 1044 | WP_089607630.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CGZ63_RS21910 | - | 4131970..4132665 (+) | 696 | WP_000434125.1 | helix-turn-helix domain-containing protein | - |
| CGZ63_RS21915 | - | 4132791..4133033 (+) | 243 | WP_000440716.1 | DUF2626 domain-containing protein | - |
| CGZ63_RS21920 | - | 4133141..4134535 (+) | 1395 | WP_001094345.1 | L-cystine transporter | - |
| CGZ63_RS21925 | - | 4134614..4135006 (-) | 393 | WP_000875394.1 | hypothetical protein | - |
| CGZ63_RS21930 | - | 4135094..4135309 (-) | 216 | WP_001008327.1 | DUF3912 family protein | - |
| CGZ63_RS21935 | - | 4135562..4135873 (+) | 312 | WP_001093237.1 | hypothetical protein | - |
| CGZ63_RS21940 | - | 4135908..4136396 (-) | 489 | WP_000764267.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39081.47 Da Isoelectric Point: 8.7212
>NTDB_id=239565 CGZ63_RS21905 WP_089607630.1 4130721..4131764(-) (comGA) [Bacillus cereus C1L]
MNGIEIFANAILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQDIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGYELKQALKEAGGEC
VTYKHETLESSIRKGYALGFLEEDVYV
MNGIEIFANAILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQDIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGYELKQALKEAGGEC
VTYKHETLESSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=239565 CGZ63_RS21905 WP_089607630.1 4130721..4131764(-) (comGA) [Bacillus cereus C1L]
ATGAATGGGATTGAAATTTTTGCGAATGCAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAGTGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTCTCACATTTCAAATTTTTAGCATCTATGGACATAGGCGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGCTACTTGTGTTTACTGGACCGACTGGATCTGGGAAGACGACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGTGATGAAGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTAATGACAACACTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGCTTCATGGATTATGGTATAACGAGGCAAGATATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAGGCTAGCATATATGAGCTACTATATGGATATGAGTTAAAACAAGCGCTTAAAGAAGCTGGTGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGTTTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGGATTGAAATTTTTGCGAATGCAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAGTGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTCTCACATTTCAAATTTTTAGCATCTATGGACATAGGCGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGCTACTTGTGTTTACTGGACCGACTGGATCTGGGAAGACGACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGTGATGAAGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTAATGACAACACTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGCTTCATGGATTATGGTATAACGAGGCAAGATATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAGGCTAGCATATATGAGCTACTATATGGATATGAGTTAAAACAAGCGCTTAAAGAAGCTGGTGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGTTTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
55.62 |
100 |
0.556 |
| pilB | Haemophilus influenzae 86-028NP |
39.752 |
92.795 |
0.369 |