Detailed information NTG0239400

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: CGZ53_RS08325
• Genome accession: NZ_CP022435
• Coordinates: 1626280..1627326 (-)
• Length: 348 a.a.
• NCBI ID: WP_015911921.1
• Uniprot ID: -
• Organism: Streptococcus uberis strain NZ01
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1621280..1632326

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CGZ53_RS08300 (CGZ53_08295)	rimI	1621927..1622352 (-)	426	WP_100912336.1	ribosomal protein S18-alanine N-acetyltransferase	-
CGZ53_RS08305 (CGZ53_08300)	tsaB	1622360..1623052 (-)	693	WP_015911917.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
CGZ53_RS08310 (CGZ53_08305)	-	1623333..1623563 (+)	231	WP_046388349.1	DNA-dependent RNA polymerase subunit epsilon	-
CGZ53_RS08315 (CGZ53_08310)	rnjA	1623565..1625247 (+)	1683	WP_046390691.1	ribonuclease J1	-
CGZ53_RS08320 (CGZ53_08315)	amiF	1625345..1626280 (-)	936	WP_015911920.1	ABC transporter ATP-binding protein	Regulator
CGZ53_RS08325 (CGZ53_08320)	oppD	1626280..1627326 (-)	1047	WP_015911921.1	ABC transporter ATP-binding protein	Regulator
CGZ53_RS08330 (CGZ53_08325)	-	1627338..1628369 (-)	1032	WP_015911922.1	ABC transporter permease	-
CGZ53_RS08335 (CGZ53_08330)	-	1628379..1629293 (-)	915	WP_015911923.1	ABC transporter permease	-
CGZ53_RS08340 (CGZ53_08335)	-	1629368..1631026 (-)	1659	WP_100912270.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38504.09 Da
• Isoelectric Point: 5.1474

>NTDB_id=239400 CGZ53_RS08325 WP_015911921.1 1626280..1627326(-) (oppD) [Streptococcus uberis strain NZ01]
MSKETILSVNNLHVDFKTYAGDVKAIRDINFELKKGETLAIVGESGSGKSVTTRTLMGLNAKNATISGDIDFKGRKLNEL
KEQDWVKVRGKEIAMIFQDPMTSLDPTMKIGMQIAEAILIHEKVSKADALSRALELMKQVGIPDAEEHINDYPHQWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQNQILKLMKELQSQISSSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTDTEAGSLQSIPGTPPDLLNPPKGDAFAARNEYALDIDHEEEPPMFKVSETHYAATWLL
DERAPKVTPPLPIQKRWAKWAEKERGQA

Nucleotide

• Length: 1047 bp

>NTDB_id=239400 CGZ53_RS08325 WP_015911921.1 1626280..1627326(-) (oppD) [Streptococcus uberis strain NZ01]
ATGTCAAAAGAAACAATTTTGAGTGTTAACAACCTCCATGTCGATTTTAAAACTTATGCTGGAGATGTTAAAGCTATTCG
CGATATTAACTTTGAGTTAAAAAAAGGTGAAACGCTTGCTATCGTTGGTGAATCAGGTTCTGGGAAATCTGTAACAACGA
GAACCTTAATGGGATTAAATGCAAAAAATGCCACTATATCAGGTGACATTGATTTCAAAGGGAGAAAGCTCAATGAGCTT
AAAGAACAAGATTGGGTTAAAGTTCGTGGTAAAGAAATTGCGATGATTTTCCAAGACCCAATGACCAGTTTAGACCCAAC
AATGAAAATTGGCATGCAAATTGCAGAAGCTATCTTGATTCACGAAAAAGTATCTAAAGCTGACGCATTATCACGTGCAT
TAGAATTGATGAAACAAGTTGGCATTCCAGATGCTGAAGAACATATTAATGATTATCCACATCAATGGTCTGGTGGTATG
AGACAACGTGCGGTAATTGCCATTGCTCTTGCAGCTAATCCTGAAATTCTCATCGCAGATGAGCCAACAACAGCCTTGGA
TGTAACCATTCAAAATCAAATTTTAAAATTGATGAAAGAATTACAGTCACAAATTTCATCTTCTATTATTTTCATCACCC
ATGATCTTGGTGTGGTAGCTGGTATGGCTGATCGTGTAGCGGTAATGTATGCTGGGAAAATTGTTGAGTATGGAACTGTA
GATGAAGTATTCTATAATCCACAACACCCATATACATGGGGATTATTGAATTCCATGCCAACGACTGATACAGAAGCAGG
AAGCTTGCAATCTATTCCAGGAACACCTCCTGACTTATTGAATCCTCCAAAAGGAGATGCATTTGCAGCTCGTAATGAAT
ACGCTCTTGATATTGATCATGAAGAAGAGCCACCAATGTTTAAAGTCAGTGAAACACACTATGCTGCAACATGGTTATTG
GATGAACGTGCTCCTAAGGTAACACCTCCTCTTCCAATCCAAAAACGTTGGGCAAAATGGGCTGAAAAAGAAAGGGGACA
AGCTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	80.588	97.701	0.787
amiE	Streptococcus salivarius strain HSISS4	57.015	96.264	0.549
amiE	Streptococcus thermophilus LMG 18311	56.418	96.264	0.543
amiE	Streptococcus thermophilus LMD-9	56.418	96.264	0.543