Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   STU_RS14845 Genome accession   NC_006448
Coordinates   1017533..1018345 (-) Length   270 a.a.
NCBI ID   WP_041828379.1    Uniprot ID   -
Organism   Streptococcus thermophilus LMG 18311     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1012533..1023345
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STU_RS14825 (stu1151) - 1013470..1013856 (-) 387 WP_002953113.1 DUF1934 domain-containing protein -
  STU_RS19505 - 1013948..1014828 (-) 881 Protein_986 GNAT family N-acetyltransferase -
  STU_RS14835 (stu1154) yidA 1015036..1015845 (+) 810 WP_011226081.1 sugar-phosphatase -
  STU_RS14840 (stu1155) - 1015847..1017061 (+) 1215 WP_004197368.1 aminoacyltransferase -
  STU_RS19510 - 1017113..1017473 (-) 361 Protein_989 YbaN family protein -
  STU_RS14845 (stu1158) vicX 1017533..1018345 (-) 813 WP_041828379.1 MBL fold metallo-hydrolase Regulator
  STU_RS14850 (stu1159) vicK 1018351..1019691 (-) 1341 WP_011226083.1 cell wall metabolism sensor histidine kinase VicK Regulator
  STU_RS14855 (stu1160) vicR 1019684..1020391 (-) 708 WP_011226084.1 response regulator YycF Regulator
  STU_RS14860 (stu1161) - 1020918..1021685 (+) 768 WP_011226085.1 amino acid ABC transporter ATP-binding protein -
  STU_RS14865 (stu1162) - 1021697..1022530 (+) 834 WP_011226086.1 transporter substrate-binding domain-containing protein -
  STU_RS14870 (stu1163) - 1022548..1023246 (+) 699 WP_011226087.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30086.10 Da        Isoelectric Point: 5.8139

>NTDB_id=23922 STU_RS14845 WP_041828379.1 1017533..1018345(-) (vicX) [Streptococcus thermophilus LMG 18311]
MTSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHDAINPQFYRFMKDGKSFVMLTDTGYVSDRMA
GLIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTME
NQLARADFGVGTDFKIFVTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=23922 STU_RS14845 WP_041828379.1 1017533..1018345(-) (vicX) [Streptococcus thermophilus LMG 18311]
ATGACCTCAGAATTAGGGTTTAAATATAGTATTTTGGCTTCAGGCTCAACCGGGAATTCCTTTTATTTGGAAACTCCAGA
AAAGAAGATTCTAGTGGATGCTGGTTTATCAGGAAAAAAAATTACAAGTTTGCTAGCGGAGATTGACCGTGATCCAAGTG
ATCTTGATGCTATCTTAGTAACACATGAACACAAGGACCATATCCATGGTGTAGGTGTTTTAGCTCGTAAATACGGCATG
GATATATACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAGAATATGCTAGGTAAGGTTGATAATAGTCAGAAACA
TATTTTTTCTCGCGGTAAGCTTCTAACCTTTGGTGATATCGACATTGAATCTTTCGGAGTTAGTCATGATGCCATTAATC
CACAATTTTACCGCTTTATGAAAGACGGAAAGAGCTTTGTCATGTTGACGGATACAGGCTATGTTTCAGACCGTATGGCT
GGTCTTATTGAAAATGCTGATGGCTATCTGATTGAATCTAATCATGATATTGAAATCTTGAGAGCAGGTTCTTATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAGGGCCACTTGTGTAATGAGGATGGAGCCGATGCTATGATTCGTACCATCG
GTAATAAAACTAAAAAGATTTATCTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAATTGGCCTACATGACGATGGAA
AATCAGTTGGCTCGCGCTGACTTTGGTGTTGGAACTGACTTTAAGATTTTTGTTACCTCACCAGATACGGCGACCCCACT
AACAGATATTTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.985

99.259

0.774

Multiple sequence alignment