Detailed information
Bioinformatically predicted
Overview
| Name | spo0A | Type | Regulator |
| Locus tag | TRNA_RS31600 | Genome accession | NC_006270 |
| Coordinates | 1983316..1983687 (+) | Length | 123 a.a. |
| NCBI ID | WP_009328223.1 | Uniprot ID | Q65J33 |
| Organism | Bacillus licheniformis DSM 13 = ATCC 14580 | ||
| Function | activation and repression of comK; repression of rok; repression of abrB (predicted from homology) Competence regulation |
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Genomic Context
Location: 1978316..1988687
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TRNA_RS31570 (BL02933) | - | 1978744..1978977 (+) | 234 | WP_003182231.1 | DUF896 domain-containing protein | - |
| TRNA_RS31575 (BL02934) | recP/tkt | 1979144..1981147 (+) | 2004 | WP_009328229.1 | transketolase | Machinery gene |
| TRNA_RS31580 (BL02935) | sirA | 1981302..1981739 (+) | 438 | WP_003182234.1 | sporulation inhibitor of replication protein SirA | - |
| TRNA_RS31585 (BL02936) | - | 1981824..1982042 (+) | 219 | WP_003182236.1 | YneF family protein | - |
| TRNA_RS31590 (BL02948) | - | 1982123..1982284 (-) | 162 | WP_202604361.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| TRNA_RS31595 (BL02937) | - | 1982527..1983234 (+) | 708 | WP_011198008.1 | cytochrome c biogenesis protein CcdA | - |
| TRNA_RS31600 (BL02938) | spo0A | 1983316..1983687 (+) | 372 | WP_009328223.1 | response regulator | Regulator |
| TRNA_RS31605 (BL02939) | - | 1983761..1984255 (+) | 495 | WP_085959522.1 | CcdC family protein | - |
| TRNA_RS31610 (BL02949) | - | 1984291..1984719 (-) | 429 | WP_003182245.1 | DUF2621 domain-containing protein | - |
| TRNA_RS31615 (BL02950) | - | 1984924..1985331 (-) | 408 | WP_003182248.1 | Hsp20/alpha crystallin family protein | - |
| TRNA_RS31620 (BL05190) | - | 1985467..1985613 (-) | 147 | WP_003182250.1 | small acid-soluble spore protein P | - |
| TRNA_RS31625 (BL05191) | sspO | 1985655..1985801 (-) | 147 | WP_003182252.1 | small acid-soluble spore protein O | - |
Sequence
Protein
Download Length: 123 a.a. Molecular weight: 13854.31 Da Isoelectric Point: 4.5739
>NTDB_id=23911 TRNA_RS31600 WP_009328223.1 1983316..1983687(+) (spo0A) [Bacillus licheniformis DSM 13 = ATCC 14580]
MTRVLIVDDAKFMRDKIREILETEDLQVAGEAENGEEAVLLYQELQPDLVIMDITMPVKNGIEALKDMIQLNPKVKVIMC
TAMRQKRIVVEAIEAGAKDFIVKPFEETKVVEAIRHVLGNACS
MTRVLIVDDAKFMRDKIREILETEDLQVAGEAENGEEAVLLYQELQPDLVIMDITMPVKNGIEALKDMIQLNPKVKVIMC
TAMRQKRIVVEAIEAGAKDFIVKPFEETKVVEAIRHVLGNACS
Nucleotide
Download Length: 372 bp
>NTDB_id=23911 TRNA_RS31600 WP_009328223.1 1983316..1983687(+) (spo0A) [Bacillus licheniformis DSM 13 = ATCC 14580]
ATGACAAGGGTTTTAATTGTTGATGATGCAAAATTTATGAGAGATAAAATTAGAGAAATACTTGAAACAGAAGACTTGCA
AGTCGCGGGTGAAGCCGAGAACGGGGAAGAAGCTGTTTTGCTTTATCAAGAGCTGCAGCCGGACTTGGTTATCATGGATA
TTACGATGCCTGTGAAAAACGGGATAGAAGCTTTAAAGGATATGATCCAGCTGAACCCGAAAGTGAAAGTGATCATGTGT
ACGGCCATGCGGCAAAAGCGGATCGTCGTTGAGGCGATCGAAGCCGGAGCCAAGGACTTCATCGTCAAGCCTTTCGAGGA
AACGAAAGTCGTCGAAGCGATTCGGCATGTGCTCGGAAATGCTTGCAGCTGA
ATGACAAGGGTTTTAATTGTTGATGATGCAAAATTTATGAGAGATAAAATTAGAGAAATACTTGAAACAGAAGACTTGCA
AGTCGCGGGTGAAGCCGAGAACGGGGAAGAAGCTGTTTTGCTTTATCAAGAGCTGCAGCCGGACTTGGTTATCATGGATA
TTACGATGCCTGTGAAAAACGGGATAGAAGCTTTAAAGGATATGATCCAGCTGAACCCGAAAGTGAAAGTGATCATGTGT
ACGGCCATGCGGCAAAAGCGGATCGTCGTTGAGGCGATCGAAGCCGGAGCCAAGGACTTCATCGTCAAGCCTTTCGAGGA
AACGAAAGTCGTCGAAGCGATTCGGCATGTGCTCGGAAATGCTTGCAGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| spo0A | Bacillus subtilis subsp. subtilis str. 168 |
37.097 |
100 |
0.374 |
| pilH | Synechocystis sp. PCC 6803 |
36.585 |
100 |
0.366 |