Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   TRNA_RS31555 Genome accession   NC_006270
Coordinates   1976925..1977548 (-) Length   207 a.a.
NCBI ID   WP_003182222.1    Uniprot ID   Q65J42
Organism   Bacillus licheniformis DSM 13 = ATCC 14580     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1971925..1982548
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TRNA_RS31530 (BL02638) wrbA 1972293..1972904 (+) 612 WP_011198006.1 NAD(P)H:quinone oxidoreductase -
  TRNA_RS43880 - 1973225..1973365 (+) 141 WP_003182211.1 hypothetical protein -
  TRNA_RS31535 (BL05187) - 1973358..1974191 (+) 834 WP_003182213.1 prohibitin family protein -
  TRNA_RS31540 (BL02641) - 1974282..1975043 (+) 762 WP_003182215.1 hypothetical protein -
  TRNA_RS31545 (BL02642) - 1975103..1975942 (+) 840 WP_003182218.1 thymidylate synthase -
  TRNA_RS31550 (BL00126) nucA/comI 1976301..1976729 (+) 429 WP_003182220.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  TRNA_RS31555 (BL00127) dinR/lexA 1976925..1977548 (-) 624 WP_003182222.1 transcriptional repressor LexA Regulator
  TRNA_RS31560 (BL05188) yneA 1977701..1978012 (+) 312 WP_003182225.1 cell division suppressor protein YneA -
  TRNA_RS31565 (BL05189) - 1978031..1978678 (+) 648 WP_003182227.1 YneB family resolvase-like protein -
  TRNA_RS31570 (BL02933) - 1978744..1978977 (+) 234 WP_003182231.1 DUF896 domain-containing protein -
  TRNA_RS31575 (BL02934) recP/tkt 1979144..1981147 (+) 2004 WP_009328229.1 transketolase Machinery gene
  TRNA_RS31580 (BL02935) sirA 1981302..1981739 (+) 438 WP_003182234.1 sporulation inhibitor of replication protein SirA -
  TRNA_RS31585 (BL02936) - 1981824..1982042 (+) 219 WP_003182236.1 YneF family protein -
  TRNA_RS31590 (BL02948) - 1982123..1982284 (-) 162 WP_202604361.1 aspartyl-phosphate phosphatase Spo0E family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23263.85 Da        Isoelectric Point: 5.3807

>NTDB_id=23909 TRNA_RS31555 WP_003182222.1 1976925..1977548(-) (dinR/lexA) [Bacillus licheniformis DSM 13 = ATCC 14580]
MTKLSKRQLDILRFIKEEVKRKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDTEEEIHIPKN
QVVNVPVIGKVTAGTPITAVENIEEYFPLPERLAPPDEHVFMLEIMGESMIDAGILDQDYVIVKQQNTANNGDIVVAMTE
DDEATVKRFFKEETHIRLQPENPTMEPIILQNVTILGKVIGVFRTVH

Nucleotide


Download         Length: 624 bp        

>NTDB_id=23909 TRNA_RS31555 WP_003182222.1 1976925..1977548(-) (dinR/lexA) [Bacillus licheniformis DSM 13 = ATCC 14580]
ATGACGAAGCTATCAAAAAGACAACTTGATATTTTGCGTTTCATTAAAGAAGAAGTGAAGCGCAAAGGCTATCCGCCTTC
CGTCAGGGAGATCGGAGAAGCGGTCGGCCTGGCGTCAAGTTCAACGGTACACGGCCACTTGGCAAGGCTTGAAACGAAGG
GATTGATCAGAAGGGATCCGACGAAGCCGAGAGCGATCGAAATTCTCGATACAGAGGAGGAAATTCATATTCCGAAAAAC
CAGGTTGTCAATGTCCCGGTCATCGGAAAGGTGACCGCCGGTACACCGATTACCGCAGTCGAAAACATCGAGGAATACTT
TCCGCTTCCCGAACGCCTGGCGCCGCCGGATGAGCACGTCTTCATGCTGGAGATCATGGGAGAAAGCATGATCGATGCCG
GAATTCTTGATCAAGATTATGTGATTGTCAAGCAGCAGAACACCGCAAACAACGGGGATATCGTCGTTGCGATGACCGAA
GACGACGAAGCGACTGTTAAGCGGTTTTTCAAGGAGGAAACCCATATCCGCCTTCAGCCGGAAAACCCGACGATGGAGCC
GATCATCCTTCAGAATGTGACGATTCTCGGAAAAGTCATCGGCGTTTTTCGCACTGTTCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-200)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65J42

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

91.304

100

0.913

Multiple sequence alignment