Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | TRNA_RS31550 | Genome accession | NC_006270 |
| Coordinates | 1976301..1976729 (+) | Length | 142 a.a. |
| NCBI ID | WP_003182220.1 | Uniprot ID | Q65J43 |
| Organism | Bacillus licheniformis DSM 13 = ATCC 14580 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1971301..1981729
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TRNA_RS31525 (BL02637) | - | 1971483..1972091 (+) | 609 | WP_009328237.1 | flavin reductase family protein | - |
| TRNA_RS31530 (BL02638) | wrbA | 1972293..1972904 (+) | 612 | WP_011198006.1 | NAD(P)H:quinone oxidoreductase | - |
| TRNA_RS43880 | - | 1973225..1973365 (+) | 141 | WP_003182211.1 | hypothetical protein | - |
| TRNA_RS31535 (BL05187) | - | 1973358..1974191 (+) | 834 | WP_003182213.1 | prohibitin family protein | - |
| TRNA_RS31540 (BL02641) | - | 1974282..1975043 (+) | 762 | WP_003182215.1 | hypothetical protein | - |
| TRNA_RS31545 (BL02642) | - | 1975103..1975942 (+) | 840 | WP_003182218.1 | thymidylate synthase | - |
| TRNA_RS31550 (BL00126) | nucA/comI | 1976301..1976729 (+) | 429 | WP_003182220.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| TRNA_RS31555 (BL00127) | dinR/lexA | 1976925..1977548 (-) | 624 | WP_003182222.1 | transcriptional repressor LexA | Regulator |
| TRNA_RS31560 (BL05188) | yneA | 1977701..1978012 (+) | 312 | WP_003182225.1 | cell division suppressor protein YneA | - |
| TRNA_RS31565 (BL05189) | - | 1978031..1978678 (+) | 648 | WP_003182227.1 | YneB family resolvase-like protein | - |
| TRNA_RS31570 (BL02933) | - | 1978744..1978977 (+) | 234 | WP_003182231.1 | DUF896 domain-containing protein | - |
| TRNA_RS31575 (BL02934) | recP/tkt | 1979144..1981147 (+) | 2004 | WP_009328229.1 | transketolase | Machinery gene |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 15332.29 Da Isoelectric Point: 7.8987
>NTDB_id=23908 TRNA_RS31550 WP_003182220.1 1976301..1976729(+) (nucA/comI) [Bacillus licheniformis DSM 13 = ATCC 14580]
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDILYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSGFADGTRILFIVQ
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDILYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSGFADGTRILFIVQ
Nucleotide
Download Length: 429 bp
>NTDB_id=23908 TRNA_RS31550 WP_003182220.1 1976301..1976729(+) (nucA/comI) [Bacillus licheniformis DSM 13 = ATCC 14580]
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTACTGCTTGGGCTTTCGGGAGGCGCCGCATATTCTCC
TCAGCATGCCGAAGGTGCTGCAAGGTATGACGACATATTGTATTTTCCGGCATCACGCTATCCCGAAACCGGCGCTCATA
TCAGCGACGCAATCAAAGCAGGGCATTCAGATGTCTGCACGATTGAAAGATCGGGAGCGGATAAGCGCCGCCAGGAATCA
CTGAAGGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGGGGCAAAGGAGC
GTCTGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGGTTTCGCCGACG
GGACGAGAATTTTGTTTATCGTTCAATAA
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTACTGCTTGGGCTTTCGGGAGGCGCCGCATATTCTCC
TCAGCATGCCGAAGGTGCTGCAAGGTATGACGACATATTGTATTTTCCGGCATCACGCTATCCCGAAACCGGCGCTCATA
TCAGCGACGCAATCAAAGCAGGGCATTCAGATGTCTGCACGATTGAAAGATCGGGAGCGGATAAGCGCCGCCAGGAATCA
CTGAAGGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGGGGCAAAGGAGC
GTCTGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGGTTTCGCCGACG
GGACGAGAATTTTGTTTATCGTTCAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
58.73 |
88.732 |
0.521 |