Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | PBPR_RS16175 | Genome accession | NC_006370 |
| Coordinates | 3608641..3609249 (+) | Length | 202 a.a. |
| NCBI ID | WP_011219741.1 | Uniprot ID | Q6LMJ0 |
| Organism | Photobacterium profundum SS9 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3603641..3614249
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PBPR_RS16150 (PBPRA3176) | panC | 3604282..3605169 (+) | 888 | WP_011219736.1 | pantoate--beta-alanine ligase | - |
| PBPR_RS16155 (PBPRA3177) | - | 3605274..3606044 (-) | 771 | WP_011219737.1 | ABC transporter permease | - |
| PBPR_RS16160 (PBPRA3178) | - | 3606041..3606979 (-) | 939 | WP_011219738.1 | ABC transporter ATP-binding protein | - |
| PBPR_RS16165 (PBPRA3179) | can | 3607107..3607763 (+) | 657 | WP_011219739.1 | carbonate dehydratase | - |
| PBPR_RS16170 (PBPRA3180) | hpt | 3607879..3608412 (-) | 534 | WP_011219740.1 | hypoxanthine phosphoribosyltransferase | - |
| PBPR_RS16175 (PBPRA3181) | opaR | 3608641..3609249 (+) | 609 | WP_011219741.1 | TetR/AcrR family transcriptional regulator | Regulator |
| PBPR_RS16180 (PBPRA3182) | - | 3609345..3610385 (-) | 1041 | WP_011219742.1 | ABC transporter ATP-binding protein | - |
| PBPR_RS16185 (PBPRA3183) | - | 3610385..3612013 (-) | 1629 | WP_011219743.1 | ABC transporter permease | - |
| PBPR_RS16190 (PBPRA3184) | - | 3612210..3613223 (-) | 1014 | WP_041394532.1 | Fe(3+) ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 202 a.a. Molecular weight: 23374.48 Da Isoelectric Point: 5.9506
>NTDB_id=23890 PBPR_RS16175 WP_011219741.1 3608641..3609249(+) (opaR) [Photobacterium profundum SS9]
MDTIVKKTRTRLSPEKRKQQLLDFALDVFARRGIGRAGHADIAEMANVSVATVFNYFPTREALVEEVLLQVENRFSLLLS
ECLDEQDKTLHARLRGISHTLIDAVIEQQDWLKVWFEWSTSVRDDIWPQFISGNKKSLKRIAAAFEQGKENNEIDSDNSS
DDLAHLLHGLCYILYLQSNLHPDQDRMREQAERYINTLYPAK
MDTIVKKTRTRLSPEKRKQQLLDFALDVFARRGIGRAGHADIAEMANVSVATVFNYFPTREALVEEVLLQVENRFSLLLS
ECLDEQDKTLHARLRGISHTLIDAVIEQQDWLKVWFEWSTSVRDDIWPQFISGNKKSLKRIAAAFEQGKENNEIDSDNSS
DDLAHLLHGLCYILYLQSNLHPDQDRMREQAERYINTLYPAK
Nucleotide
Download Length: 609 bp
>NTDB_id=23890 PBPR_RS16175 WP_011219741.1 3608641..3609249(+) (opaR) [Photobacterium profundum SS9]
ATGGATACGATCGTAAAAAAAACGCGTACTCGTCTTTCTCCTGAAAAAAGAAAGCAACAGCTTCTCGATTTTGCTTTAGA
TGTATTTGCTCGCCGCGGAATAGGCAGAGCAGGACATGCCGATATTGCTGAAATGGCCAATGTGTCAGTGGCCACCGTCT
TTAATTACTTTCCAACCCGTGAAGCACTGGTTGAAGAAGTATTGCTCCAAGTTGAAAACCGTTTTAGCCTTCTACTGTCA
GAATGCCTAGATGAGCAAGATAAAACGTTACATGCCCGTCTACGCGGCATTTCACACACTCTTATCGATGCGGTTATCGA
ACAACAAGACTGGTTAAAAGTATGGTTTGAATGGAGTACATCTGTTCGAGACGATATTTGGCCACAGTTTATTAGTGGTA
ATAAAAAAAGTCTGAAGCGCATTGCGGCAGCGTTTGAGCAGGGTAAAGAAAATAATGAAATTGATAGTGATAATTCATCT
GATGATTTAGCTCACCTTCTACACGGTCTATGCTACATCTTATACTTGCAGTCGAACTTACACCCAGATCAAGACCGAAT
GCGCGAACAAGCAGAACGCTACATCAACACTTTGTACCCTGCCAAATAA
ATGGATACGATCGTAAAAAAAACGCGTACTCGTCTTTCTCCTGAAAAAAGAAAGCAACAGCTTCTCGATTTTGCTTTAGA
TGTATTTGCTCGCCGCGGAATAGGCAGAGCAGGACATGCCGATATTGCTGAAATGGCCAATGTGTCAGTGGCCACCGTCT
TTAATTACTTTCCAACCCGTGAAGCACTGGTTGAAGAAGTATTGCTCCAAGTTGAAAACCGTTTTAGCCTTCTACTGTCA
GAATGCCTAGATGAGCAAGATAAAACGTTACATGCCCGTCTACGCGGCATTTCACACACTCTTATCGATGCGGTTATCGA
ACAACAAGACTGGTTAAAAGTATGGTTTGAATGGAGTACATCTGTTCGAGACGATATTTGGCCACAGTTTATTAGTGGTA
ATAAAAAAAGTCTGAAGCGCATTGCGGCAGCGTTTGAGCAGGGTAAAGAAAATAATGAAATTGATAGTGATAATTCATCT
GATGATTTAGCTCACCTTCTACACGGTCTATGCTACATCTTATACTTGCAGTCGAACTTACACCCAGATCAAGACCGAAT
GCGCGAACAAGCAGAACGCTACATCAACACTTTGTACCCTGCCAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
50.5 |
99.01 |
0.5 |
| hapR | Vibrio cholerae C6706 |
45.918 |
97.03 |
0.446 |
| hapR | Vibrio cholerae strain A1552 |
45.918 |
97.03 |
0.446 |