Detailed information NTG0238639

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: CEQ48_RS15755
• Genome accession: NZ_CP022353
• Coordinates: 2197191..2200724 (+)
• Length: 1177 a.a.
• NCBI ID: WP_198301176.1
• Uniprot ID: -
• Organism: Vibrio tarriae strain 2521-89
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2192191..2205724

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEQ48_RS15735 (CEQ48_15735)	erpA	2192771..2193112 (-)	342	WP_000005741.1	iron-sulfur cluster insertion protein ErpA	-
CEQ48_RS15740 (CEQ48_15740)	hemL	2193396..2194694 (+)	1299	WP_089071895.1	glutamate-1-semialdehyde 2,1-aminomutase	-
CEQ48_RS15745 (CEQ48_15745)	-	2194948..2196033 (+)	1086	WP_089071896.1	AI-2E family transporter	-
CEQ48_RS15750 (CEQ48_15750)	rsmC	2196106..2197128 (+)	1023	WP_089071897.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
CEQ48_RS15755 (CEQ48_15755)	chiS	2197191..2200724 (+)	3534	WP_198301176.1	two-component system sensor histidine kinase ChiS	Regulator
CEQ48_RS15760 (CEQ48_15760)	-	2201556..2203226 (+)	1671	WP_089071899.1	ABC transporter substrate-binding protein	-
CEQ48_RS15765 (CEQ48_15765)	-	2203396..2204382 (+)	987	WP_089071900.1	ABC transporter permease	-
CEQ48_RS15770 (CEQ48_15770)	-	2204385..2205410 (+)	1026	WP_089071901.1	ABC transporter permease	-

Sequence

Protein

• Length: 1177 a.a.
• Molecular weight: 133349.52 Da
• Isoelectric Point: 6.9114

>NTDB_id=238639 CEQ48_RS15755 WP_198301176.1 2197191..2200724(+) (chiS) [Vibrio tarriae strain 2521-89]
MRLCTRFSLDLLVKVKKLVNFVTLGFPCLSHTRAWRSPQSFTESNTLIMFRFYRKQKFKRLQNTLMAAFLALSIIPLTIT
ALFFLHSHSKDLEQQSTSYLVSVRDNKQQQVIDYMMAKESEVMGFVRSELAYASGGRFYGLVNAFQRLDVSIEAAREHAQ
QRYITGSGDQIKTSVLPQSSSYVGSERYRLLHKRYHWAYLELLKRSDFDDILLVDIDGNVVYSIYKYDNFGTNLLTGKYQ
DSNLGHTFKRLEQTVNEQRKTNEDFTPVVISDFVQEDGKQYAWLGAPIIQQGYLHSYAMFRLPSNAITKLIAEGSSNPSM
QTILVGQDHRSRTLTSAEIAVEKSKEVVDLALSGKRAVGTYTNTDGEQIIAAYAPINLKNIHWALVVELPEKEAFARVRQ
LEKLFVFAMLTAIVLVVIASHYLSNFITSPLLKLTWAAERVSAGDLDEAMINTERKDEIGRLAVSFERMQRSIREKISLI
KSQNKELENNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIGIAEALISGANGHISAAHKYQLDIIISSGQRLA
TLVDDLLDYHKMRYGALDIQRCAVDLSSATRLVLELSHHLLGKKTLRIINQVSEQPVWVSADPQRLEQVLYNLIGNAIKY
TSEGKIVISATYIDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGHDTSRYRQGAGLGLSISRQLIELMHGTLYVSSQPMV
GTTFSFTLPLASEEEIAQARLTELPHFQAPEVLDTELPEQSTLPENEHGPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQ
DGHQVLEAIKREKPELVLLDIMMPGMSGYQVCEKLRQTYDHAELPIIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELA
ARIVAHLTASKAELRRIENAQLQKELKHRAMVEASLLETQGRLLEQLESAPEAILCVKEGNKVRFANEAAARLFRRTPEQ
LKRSNAEELIAPKFLNIEQEHYCGNIDVYVDDVRQHLSADVLRLPQGSGLQAMYIFNVGGSVNAARIHNLETAVEALSSY
AFEGDKDKLQKLKELGGEFTRLADKASGEYQSKQDLMRAVLVEAMTSALNYWERVSGQSKFTFAEQSGLWRVYLDRSTLQ
TRTLDKYLRIETLPKTPRWRTVLNSLDYILEHCKEAGPERTHIEMQRDKLQKLLTSE

Nucleotide

• Length: 3534 bp

>NTDB_id=238639 CEQ48_RS15755 WP_198301176.1 2197191..2200724(+) (chiS) [Vibrio tarriae strain 2521-89]
TTGCGTCTATGCACACGCTTTAGCTTGGACTTACTTGTCAAAGTAAAAAAACTCGTTAATTTCGTTACTTTAGGTTTTCC
TTGTCTATCACACACTCGTGCTTGGCGCTCGCCGCAGAGTTTCACCGAAAGTAACACCTTAATTATGTTTAGGTTCTATC
GAAAACAAAAATTCAAACGCCTGCAAAATACGCTGATGGCAGCATTTTTGGCTCTCAGCATTATTCCATTGACCATTACT
GCACTGTTTTTCCTGCATTCACACAGTAAAGATCTGGAACAGCAGAGTACTTCTTATCTTGTTTCTGTTCGGGATAATAA
ACAGCAACAAGTTATTGACTACATGATGGCCAAAGAGTCGGAAGTGATGGGCTTTGTCCGTTCCGAGCTGGCTTATGCCA
GTGGCGGGCGTTTTTATGGTCTGGTGAATGCTTTCCAGCGTTTAGACGTCAGTATTGAAGCGGCTCGTGAGCATGCTCAG
CAGCGCTATATCACCGGCTCTGGTGATCAAATAAAAACCTCGGTACTCCCCCAATCAAGCAGCTACGTGGGCAGTGAACG
CTACCGACTGCTGCATAAACGCTATCACTGGGCTTATTTAGAACTGCTTAAACGTTCGGACTTTGATGACATCTTATTGG
TCGATATTGATGGCAACGTCGTTTATTCGATTTATAAATATGACAATTTTGGCACTAACTTATTAACGGGCAAATACCAA
GACTCCAATCTAGGCCATACCTTCAAGCGTTTAGAACAAACGGTCAATGAACAGCGCAAAACCAACGAAGATTTTACTCC
TGTCGTGATTTCTGATTTTGTGCAAGAAGATGGCAAACAATACGCTTGGCTTGGCGCACCGATTATTCAACAAGGCTATT
TACATAGCTACGCTATGTTCCGCTTGCCAAGTAATGCGATCACAAAACTCATCGCAGAAGGCAGTAGCAACCCCTCCATG
CAAACCATTTTGGTGGGACAAGATCACCGCTCAAGAACTTTAACTTCCGCCGAAATTGCGGTTGAAAAGAGTAAAGAAGT
GGTCGATTTAGCCTTATCGGGCAAACGCGCCGTAGGCACTTATACCAATACTGATGGTGAACAGATCATCGCGGCCTATG
CACCGATCAATTTGAAAAATATCCATTGGGCACTGGTGGTTGAACTGCCTGAGAAAGAAGCGTTTGCTCGCGTTCGTCAG
TTAGAAAAACTGTTTGTTTTTGCGATGTTGACGGCCATCGTCTTAGTAGTCATTGCCTCACATTACCTTTCCAATTTCAT
TACCTCACCGCTTTTGAAGCTGACATGGGCAGCCGAACGTGTTTCGGCAGGCGATCTTGATGAAGCCATGATCAATACCG
AACGCAAAGATGAAATTGGCCGATTGGCGGTTAGTTTTGAGCGCATGCAGCGTTCCATTCGCGAAAAAATATCGCTGATC
AAATCGCAAAACAAAGAGTTAGAGAACAACTTACTGATCATTCGTAAACAAAACGATGAGTTGCAGCTAGCGAATAAGCT
GAAAGATGAGTTCCTCGCCACTACATCACATGAATTACGCACTCCATTGCATGGCATGATTGGCATTGCCGAAGCGCTGA
TCTCTGGAGCGAATGGTCATATTTCAGCGGCACACAAGTATCAACTCGACATCATCATCAGCAGTGGGCAGCGATTAGCA
ACTCTGGTTGATGACTTACTCGATTACCACAAAATGCGCTATGGCGCGCTGGATATTCAAAGGTGTGCCGTCGATTTATC
GAGCGCCACGCGCTTGGTCTTAGAGCTTTCTCACCATTTACTCGGCAAGAAAACGCTGCGCATTATTAATCAGGTCTCAG
AGCAACCTGTCTGGGTTTCAGCGGATCCTCAACGCTTAGAGCAAGTCCTATATAACTTGATCGGTAATGCCATTAAGTAC
ACTTCCGAAGGCAAAATTGTTATTTCCGCGACTTATATTGACGATAAAGTGCGGGTGCAAGTGGTGGATACAGGACAAGG
CATTCCGGCAGAGCAACTAGAGCATATTTTTGAGCCATTGATTCAAGCAGGTCATGACACCAGTCGTTATCGCCAAGGCG
CAGGGCTCGGGCTTTCAATCAGCCGTCAATTAATTGAGTTGATGCACGGAACACTCTACGTGAGTAGCCAGCCGATGGTT
GGTACAACCTTCAGCTTTACGCTGCCTCTCGCTAGTGAAGAAGAGATTGCTCAAGCTCGCTTGACCGAACTCCCTCACTT
TCAAGCACCTGAGGTGTTAGATACCGAGCTGCCAGAACAAAGCACCTTACCCGAAAATGAACATGGCCCACTTCTGCTGG
TGGCCGATGATGAACCTGTCAACCTGCGTGTGTTGGACAGCTTCTTACGTCTTGAAGGTTACCGTGTGCATACCGCGCAA
GATGGGCATCAAGTGCTTGAAGCGATTAAACGTGAAAAACCTGAATTGGTGTTACTCGACATCATGATGCCAGGAATGAG
CGGTTATCAAGTGTGTGAAAAACTTCGACAAACATACGACCACGCTGAACTCCCTATTATTATGCTGACGGCACTCAACC
AGTCTGATGACCGAGTGCGAGGGTTTGAAGCCGGAGCCAATGACTACTTATCCAAACCATTCAACAAGCAAGAGCTGGCC
GCGCGCATTGTCGCTCACCTCACGGCTAGCAAAGCGGAACTGCGCCGAATTGAGAATGCCCAGCTACAAAAAGAGTTGAA
GCATCGAGCTATGGTAGAAGCGAGCCTACTGGAAACCCAAGGCCGCTTATTGGAACAGTTAGAATCTGCGCCAGAAGCGA
TTTTGTGCGTCAAAGAAGGCAATAAAGTACGTTTTGCTAATGAAGCGGCAGCACGTTTATTTAGACGTACCCCTGAGCAG
CTCAAACGCTCCAACGCCGAAGAGTTGATTGCACCTAAATTCCTGAATATTGAACAAGAGCATTACTGCGGCAATATCGA
TGTTTACGTCGATGATGTTCGCCAGCATCTCTCTGCAGATGTCCTGCGCTTGCCGCAAGGTTCTGGCTTACAAGCGATGT
ACATTTTTAATGTCGGCGGCAGCGTCAATGCCGCACGGATTCATAACCTAGAAACCGCGGTAGAAGCCCTGTCTAGCTAT
GCTTTCGAAGGCGATAAAGACAAACTGCAAAAACTCAAGGAACTGGGTGGTGAGTTTACTCGTCTTGCTGATAAAGCTTC
TGGCGAGTATCAATCGAAACAAGATTTGATGCGTGCCGTGTTAGTCGAAGCCATGACCAGTGCCTTGAACTATTGGGAGC
GAGTCTCAGGACAGAGCAAGTTTACTTTTGCAGAGCAAAGTGGCTTATGGCGCGTTTATCTTGACCGCAGCACGCTACAA
ACTCGTACCCTAGACAAATACTTACGAATTGAGACACTGCCTAAAACACCGCGTTGGCGAACCGTACTGAACTCGCTCGA
CTACATTCTTGAGCATTGCAAAGAAGCAGGTCCTGAACGCACTCACATCGAAATGCAGCGCGATAAATTACAAAAACTCC
TGACCAGTGAGTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (423-475)

• His Kinase A (phospho-acceptor) domain (HisKA) (508-573)

• PAS domain (PAS_8) (927-961)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (622-731)

• Response regulator receiver domain (Response_reg) (773-883)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	99.065	100	0.991