Detailed information NTG0238632

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: LL14B4_RS11140
• Genome accession: NZ_CP028160
• Coordinates: 2247803..2248879 (+)
• Length: 358 a.a.
• NCBI ID: WP_033900817.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain 14B4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2242803..2253879

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LL14B4_RS11115 (LL14B4_11105)	pgsA	2242963..2243535 (-)	573	WP_012898490.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
LL14B4_RS11120 (LL14B4_11110)	-	2243576..2244472 (-)	897	WP_109991315.1	helix-turn-helix domain-containing protein	-
LL14B4_RS11125 (LL14B4_11115)	yfmH	2244684..2245967 (-)	1284	WP_017865078.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
LL14B4_RS11130 (LL14B4_11120)	yfmF	2245957..2247243 (-)	1287	WP_187398478.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
LL14B4_RS11135 (LL14B4_11125)	yaaA	2247441..2247803 (+)	363	WP_109991316.1	S4 domain-containing protein YaaA	-
LL14B4_RS11140 (LL14B4_11130)	recF	2247803..2248879 (+)	1077	WP_033900817.1	DNA replication/repair protein RecF	Machinery gene
LL14B4_RS11145 (LL14B4_11135)	-	2248966..2249335 (-)	370	Protein_2170	carboxymuconolactone decarboxylase family protein	-
LL14B4_RS11150 (LL14B4_11140)	-	2249413..2249790 (+)	378	WP_109991317.1	MerR family transcriptional regulator	-
LL14B4_RS11155 (LL14B4_11145)	-	2249804..2250739 (-)	936	WP_033900815.1	alpha/beta hydrolase	-
LL14B4_RS11160 (LL14B4_11150)	galE	2250845..2251825 (-)	981	WP_033900814.1	UDP-glucose 4-epimerase GalE	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 41384.28 Da
• Isoelectric Point: 6.8652

>NTDB_id=238632 LL14B4_RS11140 WP_033900817.1 2247803..2248879(+) (recF) [Lactococcus lactis subsp. lactis strain 14B4]
MKLKAIELKNFRNYEELKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKELISWSQQEMKVSGVVEKAHVT
VPLEVQLSPKGRIAKANHLKENRLADYIGQLKILMFAPENLELVKGSPATRRKFMDIELGQIHAVYLYDSMRYNRALKER
NAYLKFDKDKIDKNFLSVLDGQLAEHGNKIMLERQNFIDKLEVHAKKIHEQLTHGKENLKIIYNQNVKTDFSKELLSRQD
HDIFRHQTSVGPHRDDLQFFINEINVADFGSQGQQRTVALSIKLAEIDLIFEETGEYPILLLDDVMSELDNHRQLDLIET
SLGKTQTFITTTTLDHLKNLPENLSIFHVNAGTIEQEQ

Nucleotide

• Length: 1077 bp

>NTDB_id=238632 LL14B4_RS11140 WP_033900817.1 2247803..2248879(+) (recF) [Lactococcus lactis subsp. lactis strain 14B4]
ATGAAACTCAAAGCAATTGAACTCAAAAATTTTCGTAATTATGAGGAATTAAAACTTGATTTTCATCCTAATCTCAATAT
TTTTTTAGGACAAAATGCTCAAGGGAAAACAAATATTCTTGAGGCGATTCATTTTTTAGCACTCACTCGTAGTCACAGAA
CAAGTCACGACAAAGAGCTCATTTCTTGGTCGCAACAAGAAATGAAGGTCTCAGGAGTCGTTGAAAAAGCTCATGTAACT
GTTCCACTTGAAGTTCAATTAAGTCCCAAAGGGAGAATTGCTAAAGCCAATCATCTCAAAGAAAATCGCTTAGCCGACTA
CATTGGTCAACTAAAAATCTTGATGTTTGCACCTGAAAATTTGGAATTAGTCAAAGGTTCTCCAGCTACCCGCAGAAAAT
TTATGGATATTGAACTGGGACAAATCCATGCGGTTTACCTTTATGATTCCATGCGATATAATCGTGCGTTAAAAGAACGG
AATGCTTACTTAAAATTTGATAAAGACAAAATTGATAAAAATTTTTTAAGTGTTCTTGACGGACAATTAGCTGAACATGG
TAATAAAATCATGCTTGAGCGGCAAAATTTTATTGATAAACTTGAAGTTCATGCAAAAAAAATCCATGAGCAACTTACTC
ATGGTAAAGAAAATTTAAAAATCATTTATAATCAAAATGTGAAAACTGACTTTTCAAAAGAATTATTGAGCAGACAAGAC
CATGATATTTTTAGGCATCAAACATCGGTTGGACCTCATCGTGACGATTTACAATTTTTTATCAATGAGATTAATGTTGC
TGATTTTGGTAGTCAAGGACAACAACGAACCGTTGCTCTCTCAATTAAATTAGCAGAAATTGATTTAATTTTTGAAGAGA
CTGGTGAGTATCCGATTTTACTTTTAGATGATGTCATGAGTGAATTAGACAATCATCGTCAACTTGATTTGATTGAAACA
AGTTTGGGTAAAACACAAACTTTTATAACTACAACTACTCTTGATCATCTTAAAAATTTACCTGAAAATCTGAGTATTTT
CCATGTTAATGCTGGAACCATTGAACAAGAGCAATAA

Domains

Predicted by InterProScan.

• AAA ATPase domain (AAA_15) (1-174)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	55	100	0.553
recF	Bacillus subtilis subsp. subtilis str. 168	45.977	97.207	0.447