Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CCX84_RS19805 Genome accession   NZ_CP022345
Coordinates   3702712..3702888 (-) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis strain c25     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3697712..3707888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCX84_RS19785 - 3698504..3699250 (-) 747 WP_000966128.1 YjbA family protein -
  CCX84_RS19790 - 3699394..3700182 (-) 789 WP_000513275.1 DUF2268 domain-containing putative Zn-dependent protease -
  CCX84_RS19795 fabF 3700289..3701527 (-) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  CCX84_RS19800 fabH 3701559..3702491 (-) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  CCX84_RS19805 comZ 3702712..3702888 (-) 177 WP_001986215.1 ComZ family protein Regulator
  CCX84_RS19810 - 3702943..3703815 (-) 873 WP_001986101.1 NAD(P)-dependent oxidoreductase -
  CCX84_RS19815 - 3703845..3704579 (-) 735 WP_000028714.1 hydrolase -
  CCX84_RS19820 - 3704736..3704918 (+) 183 WP_001211116.1 YjzD family protein -
  CCX84_RS19825 clpC 3704958..3707558 (-) 2601 WP_000365398.1 ATP-dependent chaperone ClpB Regulator

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=238543 CCX84_RS19805 WP_001986215.1 3702712..3702888(-) (comZ) [Bacillus thuringiensis strain c25]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=238543 CCX84_RS19805 WP_001986215.1 3702712..3702888(-) (comZ) [Bacillus thuringiensis strain c25]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAGGCTTATGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment