Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   C5P47_RS02500 Genome accession   NZ_CP028140
Coordinates   456351..457160 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   A0A0H2UTH0
Organism   Streptococcus pyogenes strain NGAS979     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 451351..462160
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5P47_RS02480 (C5P47_02470) - 451793..453040 (+) 1248 WP_032464244.1 AMP-binding protein -
  C5P47_RS02485 (C5P47_02475) - 453096..454130 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  C5P47_RS02490 (C5P47_02480) yycF 454292..455002 (+) 711 WP_110410764.1 response regulator YycF -
  C5P47_RS02495 (C5P47_02485) vicK 454995..456347 (+) 1353 WP_002985643.1 cell wall metabolism sensor histidine kinase VicK Regulator
  C5P47_RS02500 (C5P47_02490) vicX 456351..457160 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  C5P47_RS02505 (C5P47_02495) rnc 457592..458284 (+) 693 WP_002985639.1 ribonuclease III -
  C5P47_RS02510 (C5P47_02500) smc 458285..461824 (+) 3540 WP_110410765.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=238323 C5P47_RS02500 WP_002985641.1 456351..457160(+) (vicX) [Streptococcus pyogenes strain NGAS979]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=238323 C5P47_RS02500 WP_002985641.1 456351..457160(+) (vicX) [Streptococcus pyogenes strain NGAS979]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UTH0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment