Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | CFH90_RS02030 | Genome accession | NZ_CP022298 |
| Coordinates | 414805..415242 (+) | Length | 145 a.a. |
| NCBI ID | WP_126035102.1 | Uniprot ID | A0A3S9AH13 |
| Organism | Acinetobacter johnsonii strain IC001 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 409805..420242
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFH90_RS02020 (CFH90_02005) | - | 410492..411268 (+) | 777 | WP_126035098.1 | PilX N-terminal domain-containing pilus assembly protein | - |
| CFH90_RS02025 (CFH90_02010) | - | 411285..414794 (+) | 3510 | WP_126035100.1 | hypothetical protein | - |
| CFH90_RS02030 (CFH90_02015) | comE | 414805..415242 (+) | 438 | WP_126035102.1 | type IV pilin protein | Machinery gene |
| CFH90_RS02035 (CFH90_02020) | - | 415236..415706 (+) | 471 | WP_126035104.1 | type IV pilin protein | - |
| CFH90_RS02040 (CFH90_02025) | rpsP | 415853..416110 (+) | 258 | WP_126035106.1 | 30S ribosomal protein S16 | - |
| CFH90_RS02045 (CFH90_02030) | rimM | 416136..416684 (+) | 549 | WP_126035108.1 | ribosome maturation factor RimM | - |
| CFH90_RS02050 (CFH90_02035) | trmD | 416712..417452 (+) | 741 | WP_094148539.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| CFH90_RS02055 (CFH90_02040) | rplS | 417593..417967 (+) | 375 | WP_004691454.1 | 50S ribosomal protein L19 | - |
| CFH90_RS02060 (CFH90_02045) | - | 418026..418997 (-) | 972 | WP_126035110.1 | esterase/lipase family protein | - |
| CFH90_RS02065 (CFH90_02050) | - | 419171..420136 (-) | 966 | WP_126035112.1 | esterase/lipase family protein | - |
Sequence
Protein
Download Length: 145 a.a. Molecular weight: 15983.30 Da Isoelectric Point: 10.1026
>NTDB_id=238185 CFH90_RS02030 WP_126035102.1 414805..415242(+) (comE) [Acinetobacter johnsonii strain IC001]
MNKNGFTLIELMVVVVIVAIFVAIAIPSYQAYIRRAETSKAQQELKRIATLLERHKARNFSYKGFDLSAQTLSTPRTYSF
DLKDGADTTKLLNATGASGRTWVLKATTTDTKNYNYLLTSSGIRCRNLTAANITYTGCGTGGEAW
MNKNGFTLIELMVVVVIVAIFVAIAIPSYQAYIRRAETSKAQQELKRIATLLERHKARNFSYKGFDLSAQTLSTPRTYSF
DLKDGADTTKLLNATGASGRTWVLKATTTDTKNYNYLLTSSGIRCRNLTAANITYTGCGTGGEAW
Nucleotide
Download Length: 438 bp
>NTDB_id=238185 CFH90_RS02030 WP_126035102.1 414805..415242(+) (comE) [Acinetobacter johnsonii strain IC001]
ATGAATAAAAATGGTTTCACCTTAATTGAATTGATGGTGGTAGTTGTGATTGTTGCGATATTCGTAGCAATCGCAATTCC
ATCCTATCAAGCTTATATCCGTAGAGCGGAGACTTCGAAAGCACAACAAGAGCTTAAACGTATTGCTACACTGCTTGAAC
GTCACAAAGCTCGGAATTTTAGTTATAAAGGCTTTGATTTATCAGCTCAAACTCTAAGCACTCCTAGAACATATAGTTTT
GATTTGAAAGATGGTGCTGACACAACTAAGTTGTTGAATGCAACAGGTGCTTCAGGGCGTACTTGGGTCCTTAAAGCGAC
TACAACTGATACGAAAAATTATAATTATTTGCTTACCAGTTCTGGAATACGTTGCAGAAATTTAACAGCAGCCAATATTA
CCTACACAGGGTGTGGTACAGGAGGGGAGGCATGGTAA
ATGAATAAAAATGGTTTCACCTTAATTGAATTGATGGTGGTAGTTGTGATTGTTGCGATATTCGTAGCAATCGCAATTCC
ATCCTATCAAGCTTATATCCGTAGAGCGGAGACTTCGAAAGCACAACAAGAGCTTAAACGTATTGCTACACTGCTTGAAC
GTCACAAAGCTCGGAATTTTAGTTATAAAGGCTTTGATTTATCAGCTCAAACTCTAAGCACTCCTAGAACATATAGTTTT
GATTTGAAAGATGGTGCTGACACAACTAAGTTGTTGAATGCAACAGGTGCTTCAGGGCGTACTTGGGTCCTTAAAGCGAC
TACAACTGATACGAAAAATTATAATTATTTGCTTACCAGTTCTGGAATACGTTGCAGAAATTTAACAGCAGCCAATATTA
CCTACACAGGGTGTGGTACAGGAGGGGAGGCATGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Acinetobacter baylyi ADP1 |
46.386 |
100 |
0.531 |
| pilY2 | Acinetobacter baumannii D1279779 |
50.667 |
100 |
0.524 |