Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   ACIAD_RS01230 Genome accession   NC_005966
Coordinates   260868..261503 (-) Length   211 a.a.
NCBI ID   WP_004920720.1    Uniprot ID   Q6FFD1
Organism   Acinetobacter baylyi ADP1     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 255868..266503
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACIAD_RS01215 (ACIAD0257) - 256653..257834 (+) 1182 WP_004920728.1 S41 family peptidase -
  ACIAD_RS01220 (ACIAD0258) - 257836..259251 (-) 1416 WP_004920725.1 sigma-54-dependent transcriptional regulator -
  ACIAD_RS01225 (ACIAD0259) pilS 259269..260846 (-) 1578 WP_004920722.1 sensor histidine kinase Regulator
  ACIAD_RS01230 (ACIAD0260) letA 260868..261503 (-) 636 WP_004920720.1 response regulator transcription factor GacA Regulator
  ACIAD_RS01235 (ACIAD0262) pbpG 261717..262775 (+) 1059 WP_004920717.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  ACIAD_RS01240 (ACIAD0263) thrC 262869..264008 (-) 1140 WP_004920712.1 threonine synthase -
  ACIAD_RS01245 (ACIAD0264) - 264069..265370 (-) 1302 WP_004920709.1 homoserine dehydrogenase -
  ACIAD_RS01250 (ACIAD0265) - 265546..266358 (-) 813 WP_004920707.1 DsbC family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23167.82 Da        Isoelectric Point: 5.0905

>NTDB_id=23696 ACIAD_RS01230 WP_004920720.1 260868..261503(-) (letA) [Acinetobacter baylyi ADP1]
MITVLVVDDHELVRTGICRMLEDQADVDVIGQAESGEEAINIVRQKHPQVVLLDVNMPGIGGVETTRRLLQTAPDTKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDALSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLSIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=23696 ACIAD_RS01230 WP_004920720.1 260868..261503(-) (letA) [Acinetobacter baylyi ADP1]
GTGATCACTGTATTAGTCGTTGATGACCATGAATTGGTACGTACGGGTATTTGCCGTATGCTTGAGGATCAAGCCGATGT
TGATGTGATTGGGCAAGCAGAATCTGGAGAAGAAGCCATTAATATTGTGCGTCAGAAGCATCCTCAAGTGGTTTTACTAG
ATGTCAATATGCCTGGTATTGGTGGTGTAGAAACGACACGTCGCTTATTGCAGACAGCTCCAGACACCAAAGTGATTGCG
GTGAGCGGTCTAGCAGAAGAACCCTACCCATCGCTCTTACTGAAAGCAGGTGCCAAAGGTTATATCACCAAAGGTGCCCC
CATTGCTGAAATGGTTCGCGCCATTAATAAAGTGATGCAAGGTGGAAAATACTTTAGTGCTGATATTGCCGAGCAGCTTG
CCAGCTCTTACCTTTCCGACACTCAACAATCTCCATTTGATGCTTTATCAGAACGTGAAATGCAGGTCGCCATGATGGTC
GTTAACTGTATTAGTGCTCAGGAAATTGCAGATAAACTCTTTGTTAGTGTTAAAACAGTGAATACTTACCGCTATCGAAT
TTTTGAAAAACTCAGCATCGATAGCGATGTAAAACTCACCCATCTAGCAATACGTTACGGATTAATCAAACCTTAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, luxR family (GerE)

(148-203)

Response regulator receiver domain (Response_reg)

(4-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q6FFD1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

54.762

99.526

0.545
  letA Legionella pneumophila strain ERS1305867

54.762

99.526

0.545