Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | CEQ50_RS03045 | Genome accession | NZ_CP022103 |
| Coordinates | 615340..615957 (-) | Length | 205 a.a. |
| NCBI ID | WP_017043694.1 | Uniprot ID | A0A233HMW8 |
| Organism | Vibrio anguillarum strain CNEVA NB11008 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 610340..620957
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEQ50_RS03035 (CEQ50_03045) | aceF | 611611..613494 (+) | 1884 | WP_088731724.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| CEQ50_RS03040 (CEQ50_03050) | lpdA | 613795..615222 (+) | 1428 | WP_088731726.1 | dihydrolipoyl dehydrogenase | - |
| CEQ50_RS03045 (CEQ50_03055) | opaR | 615340..615957 (-) | 618 | WP_017043694.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| CEQ50_RS03050 (CEQ50_03060) | hpt | 616329..616859 (+) | 531 | WP_010319544.1 | hypoxanthine phosphoribosyltransferase | - |
| CEQ50_RS03055 (CEQ50_03065) | can | 616957..617625 (-) | 669 | WP_013857670.1 | carbonate dehydratase | - |
| CEQ50_RS03060 (CEQ50_03070) | - | 617876..619543 (+) | 1668 | WP_047690045.1 | SulP family inorganic anion transporter | - |
| CEQ50_RS03065 (CEQ50_03075) | - | 619685..620605 (+) | 921 | WP_026027559.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23672.24 Da Isoelectric Point: 6.1461
>NTDB_id=236819 CEQ50_RS03045 WP_017043694.1 615340..615957(-) (opaR) [Vibrio anguillarum strain CNEVA NB11008]
METSIEKRPRTRLSPQKRKLQLMEIALEVFATRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVRQFSNFL
ADNIDLDLHAKDNLTNITTKMISLVIEDCHWLKVWFEWSASTREEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHEP
EHLATLFLGIFYSLFVQANRIQDEASMGVLVKSYLSMLCIYKKDH
METSIEKRPRTRLSPQKRKLQLMEIALEVFATRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVRQFSNFL
ADNIDLDLHAKDNLTNITTKMISLVIEDCHWLKVWFEWSASTREEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHEP
EHLATLFLGIFYSLFVQANRIQDEASMGVLVKSYLSMLCIYKKDH
Nucleotide
Download Length: 618 bp
>NTDB_id=236819 CEQ50_RS03045 WP_017043694.1 615340..615957(-) (opaR) [Vibrio anguillarum strain CNEVA NB11008]
ATGGAAACATCGATAGAAAAACGCCCCAGAACTCGCTTATCACCACAAAAACGCAAACTTCAACTGATGGAAATCGCCCT
TGAAGTGTTTGCAACACGGGGAATAGGCCGAGGTGGCCACGCAGATATTGCTGAAATCGCCCAAGTTTCAGTCGCTACTG
TCTTTAATTACTTTCCAACCCGAGAAGATTTAGTCGACGACGTACTCACTCATGTTGTACGTCAGTTTTCAAACTTCCTC
GCAGATAATATTGATCTTGATTTGCATGCGAAAGATAACTTAACCAACATCACCACTAAGATGATTTCTCTTGTGATTGA
AGATTGTCACTGGTTAAAAGTATGGTTTGAATGGAGCGCTTCAACGCGCGAAGAAGTGTGGCCACTTTTTGTCTCCACCA
ACCGTACTAATCAACTTTTGGTACAAAATATGTTTATCAAAGCCATTGAACGTGGCGAAGTGTGCGATCAACATGAGCCA
GAACATCTTGCTACGCTCTTTCTTGGTATCTTCTACTCACTGTTTGTACAAGCAAATCGCATACAAGACGAAGCCAGCAT
GGGTGTACTCGTGAAAAGCTACCTCAGCATGCTCTGCATCTATAAAAAAGATCACTAG
ATGGAAACATCGATAGAAAAACGCCCCAGAACTCGCTTATCACCACAAAAACGCAAACTTCAACTGATGGAAATCGCCCT
TGAAGTGTTTGCAACACGGGGAATAGGCCGAGGTGGCCACGCAGATATTGCTGAAATCGCCCAAGTTTCAGTCGCTACTG
TCTTTAATTACTTTCCAACCCGAGAAGATTTAGTCGACGACGTACTCACTCATGTTGTACGTCAGTTTTCAAACTTCCTC
GCAGATAATATTGATCTTGATTTGCATGCGAAAGATAACTTAACCAACATCACCACTAAGATGATTTCTCTTGTGATTGA
AGATTGTCACTGGTTAAAAGTATGGTTTGAATGGAGCGCTTCAACGCGCGAAGAAGTGTGGCCACTTTTTGTCTCCACCA
ACCGTACTAATCAACTTTTGGTACAAAATATGTTTATCAAAGCCATTGAACGTGGCGAAGTGTGCGATCAACATGAGCCA
GAACATCTTGCTACGCTCTTTCTTGGTATCTTCTACTCACTGTTTGTACAAGCAAATCGCATACAAGACGAAGCCAGCAT
GGGTGTACTCGTGAAAAGCTACCTCAGCATGCTCTGCATCTATAAAAAAGATCACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
82.178 |
98.537 |
0.81 |
| hapR | Vibrio cholerae C6706 |
74.257 |
98.537 |
0.732 |
| hapR | Vibrio cholerae strain A1552 |
74.257 |
98.537 |
0.732 |