Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | CEJ46_RS12645 | Genome accession | NZ_CP022101 |
| Coordinates | 2733718..2734320 (-) | Length | 200 a.a. |
| NCBI ID | WP_064625964.1 | Uniprot ID | A0A233HKZ5 |
| Organism | Vibrio anguillarum strain JLL237 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2728718..2739320
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEJ46_RS12620 (CEJ46_12620) | aroB | 2729065..2730153 (-) | 1089 | WP_088721344.1 | 3-dehydroquinate synthase | - |
| CEJ46_RS12625 (CEJ46_12625) | aroK | 2730177..2730698 (-) | 522 | WP_010317691.1 | shikimate kinase AroK | - |
| CEJ46_RS12630 (CEJ46_12630) | pilQ | 2730885..2732600 (-) | 1716 | WP_013855889.1 | type IV pilus secretin PilQ | Machinery gene |
| CEJ46_RS12635 (CEJ46_12635) | pilP | 2732624..2733145 (-) | 522 | WP_013855888.1 | pilus assembly protein PilP | Machinery gene |
| CEJ46_RS12640 (CEJ46_12640) | pilO | 2733132..2733725 (-) | 594 | WP_013855887.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CEJ46_RS12645 (CEJ46_12645) | pilN | 2733718..2734320 (-) | 603 | WP_064625964.1 | PilN domain-containing protein | Machinery gene |
| CEJ46_RS12650 (CEJ46_12650) | pilM | 2734310..2735320 (-) | 1011 | WP_088721345.1 | type IV pilus assembly protein PilM | Machinery gene |
| CEJ46_RS12655 (CEJ46_12655) | - | 2735470..2737968 (+) | 2499 | WP_088721346.1 | penicillin-binding protein 1A | - |
| CEJ46_RS12660 (CEJ46_12660) | oxyR | 2738005..2738895 (-) | 891 | WP_026027425.1 | DNA-binding transcriptional regulator OxyR | - |
Sequence
Protein
Download Length: 200 a.a. Molecular weight: 22701.24 Da Isoelectric Point: 9.6928
>NTDB_id=236790 CEJ46_RS12645 WP_064625964.1 2733718..2734320(-) (pilN) [Vibrio anguillarum strain JLL237]
MLHSINLLPWREEQRAAHKRRFMGLVVLGVMSAVGIQWGIGLYFSGQAQQQESRLAYLNQYIQQLDKQINALKMTEQEHK
ALLTRLSVVESLQSQRNKTTELMNLMPQLMPEGVYVDKIKMNGEEIEITGISDSTARLATMLDNFEKSALLSDVNMHSIV
HGNKRFGKEFQTFKVSFMFHSPTPQGAVLTKIRPTGAVHD
MLHSINLLPWREEQRAAHKRRFMGLVVLGVMSAVGIQWGIGLYFSGQAQQQESRLAYLNQYIQQLDKQINALKMTEQEHK
ALLTRLSVVESLQSQRNKTTELMNLMPQLMPEGVYVDKIKMNGEEIEITGISDSTARLATMLDNFEKSALLSDVNMHSIV
HGNKRFGKEFQTFKVSFMFHSPTPQGAVLTKIRPTGAVHD
Nucleotide
Download Length: 603 bp
>NTDB_id=236790 CEJ46_RS12645 WP_064625964.1 2733718..2734320(-) (pilN) [Vibrio anguillarum strain JLL237]
ATGTTGCATAGTATTAACTTACTGCCTTGGCGAGAGGAACAAAGAGCGGCGCATAAGCGTCGTTTTATGGGCTTGGTCGT
CTTAGGTGTGATGAGCGCTGTAGGTATTCAATGGGGTATCGGTTTGTATTTCTCTGGGCAAGCGCAGCAGCAAGAGTCTC
GTCTGGCTTATTTGAATCAATACATTCAGCAGCTTGATAAACAGATCAATGCATTAAAAATGACGGAACAAGAACACAAG
GCACTATTAACTCGCTTATCGGTTGTTGAGTCATTGCAAAGCCAACGCAATAAAACCACCGAGTTGATGAACCTGATGCC
ACAGCTTATGCCTGAAGGAGTCTACGTCGATAAGATCAAAATGAATGGTGAAGAAATTGAAATTACGGGCATCAGTGACA
GCACTGCGCGTCTTGCGACCATGCTCGATAATTTTGAAAAATCAGCCTTACTTTCCGATGTCAACATGCACTCTATCGTT
CATGGTAATAAGCGATTTGGTAAGGAGTTTCAGACGTTTAAAGTGTCATTTATGTTTCATTCCCCGACACCACAGGGCGC
TGTGCTAACCAAGATTCGGCCTACAGGAGCTGTCCATGACTAG
ATGTTGCATAGTATTAACTTACTGCCTTGGCGAGAGGAACAAAGAGCGGCGCATAAGCGTCGTTTTATGGGCTTGGTCGT
CTTAGGTGTGATGAGCGCTGTAGGTATTCAATGGGGTATCGGTTTGTATTTCTCTGGGCAAGCGCAGCAGCAAGAGTCTC
GTCTGGCTTATTTGAATCAATACATTCAGCAGCTTGATAAACAGATCAATGCATTAAAAATGACGGAACAAGAACACAAG
GCACTATTAACTCGCTTATCGGTTGTTGAGTCATTGCAAAGCCAACGCAATAAAACCACCGAGTTGATGAACCTGATGCC
ACAGCTTATGCCTGAAGGAGTCTACGTCGATAAGATCAAAATGAATGGTGAAGAAATTGAAATTACGGGCATCAGTGACA
GCACTGCGCGTCTTGCGACCATGCTCGATAATTTTGAAAAATCAGCCTTACTTTCCGATGTCAACATGCACTCTATCGTT
CATGGTAATAAGCGATTTGGTAAGGAGTTTCAGACGTTTAAAGTGTCATTTATGTTTCATTCCCCGACACCACAGGGCGC
TGTGCTAACCAAGATTCGGCCTACAGGAGCTGTCCATGACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Vibrio cholerae strain A1552 |
66.667 |
94.5 |
0.63 |
| pilN | Vibrio campbellii strain DS40M4 |
65.775 |
93.5 |
0.615 |