Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   CEP67_RS11905 Genome accession   NZ_CP022096
Coordinates   2499460..2500026 (-) Length   188 a.a.
NCBI ID   WP_002471889.1    Uniprot ID   -
Organism   Staphylococcus pettenkoferi strain FDAARGOS_288     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2494460..2505026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEP67_RS11880 (CEP67_11915) - 2495137..2496648 (+) 1512 WP_002472260.1 bifunctional metallophosphatase/5'-nucleotidase -
  CEP67_RS11885 (CEP67_11920) - 2496937..2497671 (+) 735 WP_070502997.1 halocin C8 precursor-like protein -
  CEP67_RS12175 (CEP67_11925) - 2498240..2498437 (+) 198 WP_081479397.1 helix-turn-helix transcriptional regulator -
  CEP67_RS11905 (CEP67_11940) comK/comK1 2499460..2500026 (-) 567 WP_002471889.1 competence protein ComK Regulator
  CEP67_RS11910 (CEP67_11945) - 2500306..2500524 (+) 219 WP_002471866.1 IDEAL domain-containing protein -
  CEP67_RS11915 (CEP67_11950) - 2500611..2501600 (-) 990 WP_002471863.1 lipoate--protein ligase -
  CEP67_RS11920 (CEP67_11955) - 2501888..2502073 (+) 186 WP_002471890.1 YkvS family protein -

Sequence

Protein


Download         Length: 188 a.a.        Molecular weight: 21946.57 Da        Isoelectric Point: 9.9557

>NTDB_id=236665 CEP67_RS11905 WP_002471889.1 2499460..2500026(-) (comK/comK1) [Staphylococcus pettenkoferi strain FDAARGOS_288]
MKLDVIQQEDMALYPISNGRGMHASTKILKVNSPSLILPKKPQKVLEVSCRFYGAPYLHKKNEATRITGITSKPPILLTP
LFPTYFFPTHSDRKSENAWINIHYVEKIKELKDKRCKIFFVDNQTLTVNVSKHSLDHQYKNSILYNFLMERSVKVFTSDP
NNPIDYAKKELNIYEVLIKYAKLFEHKE

Nucleotide


Download         Length: 567 bp        

>NTDB_id=236665 CEP67_RS11905 WP_002471889.1 2499460..2500026(-) (comK/comK1) [Staphylococcus pettenkoferi strain FDAARGOS_288]
ATGAAACTTGACGTTATTCAGCAAGAAGACATGGCACTTTACCCGATTAGTAACGGTAGAGGGATGCATGCAAGCACCAA
AATCCTGAAAGTTAATTCACCATCACTTATTTTACCGAAAAAACCTCAAAAGGTATTAGAAGTGTCATGTAGGTTCTACG
GTGCTCCCTACTTACATAAAAAGAATGAAGCGACCCGTATAACCGGAATTACTAGTAAGCCACCTATTTTATTAACGCCA
CTTTTTCCAACCTATTTTTTCCCTACGCATTCAGACCGTAAATCAGAGAACGCTTGGATTAACATCCACTACGTTGAAAA
GATTAAAGAACTTAAAGATAAAAGATGTAAAATCTTTTTCGTGGATAATCAAACCTTAACTGTTAACGTTTCTAAACATA
GCTTAGATCATCAATACAAAAATTCCATTTTATATAATTTTTTAATGGAACGATCAGTAAAAGTATTTACTAGTGATCCT
AATAATCCTATAGATTATGCTAAAAAGGAACTTAACATTTACGAAGTGCTTATTAAATACGCGAAACTATTTGAACATAA
GGAGTAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(5-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

49.727

97.34

0.484
  comK/comK1 Staphylococcus aureus N315

49.727

97.34

0.484

Multiple sequence alignment