Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   CEP67_RS08670 Genome accession   NZ_CP022096
Coordinates   1855434..1856102 (+) Length   222 a.a.
NCBI ID   WP_002472782.1    Uniprot ID   -
Organism   Staphylococcus pettenkoferi strain FDAARGOS_288     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1850434..1861102
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEP67_RS08655 (CEP67_08675) - 1850570..1851544 (+) 975 WP_088606535.1 SMP-30/gluconolactonase/LRE family protein -
  CEP67_RS08660 (CEP67_08680) - 1851971..1853113 (+) 1143 WP_002472789.1 globin domain-containing protein -
  CEP67_RS08665 (CEP67_08685) - 1853661..1855055 (+) 1395 WP_065429101.1 MDR family MFS transporter -
  CEP67_RS08670 (CEP67_08690) braR 1855434..1856102 (+) 669 WP_002472782.1 response regulator transcription factor Regulator
  CEP67_RS08675 (CEP67_08695) braS 1856116..1857018 (+) 903 WP_002472754.1 sensor histidine kinase Regulator
  CEP67_RS08680 (CEP67_08700) - 1857764..1859875 (-) 2112 WP_002472768.1 diflavin oxidoreductase -
  CEP67_RS08685 (CEP67_08705) - 1860149..1860889 (-) 741 WP_002472722.1 cyclase family protein -

Sequence


Protein


Download         Length: 222 a.a.        Molecular weight: 26044.86 Da        Isoelectric Point: 5.1489

>NTDB_id=236657 CEP67_RS08670 WP_002472782.1 1855434..1856102(+) (braR) [Staphylococcus pettenkoferi strain FDAARGOS_288]
MKILIIEDDLVIAESLQAELNKWHYEVDIARDFSAIMEEFEQSNPHLILLDIKLPSFNGFHWCQEIRRHSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFDMSLTIAKIQALMRRTYNFTVDHNRLEVQNCQLLIDEAKLSYQGQSEKLSFTELQIMQ
SLFQNEGKYVSKTDLIEKCWESEHFIDDNTLAVNMTRIRKKLQNIGLPHFIETKKNVGYRVN

Nucleotide


Download         Length: 669 bp        

>NTDB_id=236657 CEP67_RS08670 WP_002472782.1 1855434..1856102(+) (braR) [Staphylococcus pettenkoferi strain FDAARGOS_288]
ATGAAGATATTAATCATTGAAGATGATTTGGTTATCGCAGAAAGTTTACAAGCTGAACTCAATAAATGGCACTACGAGGT
TGATATTGCGCGAGATTTCAGTGCGATTATGGAAGAATTTGAACAGAGTAATCCGCATCTCATCTTATTAGATATTAAAT
TACCGTCATTCAACGGTTTCCATTGGTGCCAAGAAATACGACGTCACTCTAACGTGCCCATTATCTTTATTAGCTCGCGT
ACGGATAATATGGATCAAATTATGGCAATACAAATGGGCGGCGATGATTTTATTGAGAAACCGTTTGATATGTCATTAAC
GATAGCTAAGATTCAAGCTCTGATGCGACGCACGTACAACTTCACAGTAGACCACAATCGTCTTGAAGTGCAGAACTGTC
AACTACTGATAGATGAAGCGAAGTTGAGCTATCAAGGGCAATCTGAGAAATTATCCTTTACTGAGCTACAAATTATGCAG
TCATTATTTCAAAATGAAGGAAAGTATGTGAGTAAGACAGATTTAATTGAAAAATGTTGGGAATCTGAACATTTTATCGA
TGATAATACGCTAGCAGTCAATATGACTCGCATTCGCAAGAAACTACAAAATATCGGCTTACCTCATTTTATTGAAACGA
AGAAAAATGTAGGCTATCGGGTAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

70.136

99.55

0.698


Multiple sequence alignment